RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TNFSF18Q9UNG2 199 aa12.04□□□□□ -0.48
PDLIM5-202ENST00000318007 NPIPB5A8MRT5 1133 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 TSC22D2O75157 780 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 TSPAN9O75954 239 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 TRGV3P03979 118 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 SLC25A4P12235 298 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 CXCL2P19875 107 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 PPIFP30405 207 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 RAB11AP62491 216 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 STX12Q86Y82 276 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 KLHDC1Q8N7A1 406 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 OR5C1Q8NGR4 320 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 FAM110DQ8TAY7 271 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 FANCD2OSQ96PS1 177 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 MFSD2BA6NFX1 497 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 NUP62P37198 522 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 SUB1P53999 127 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 RHOGP84095 191 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 TMEM14EPQ6UXP3 125 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 ACOT7LQ6ZUV0 252 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 Q8N2B8 174 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 LILRB2Q8N423 598 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 OR1P1Q8NH06 330 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 BOLA1Q9Y3E2 137 aa12.03□□□□□ -0.48
PDLIM5-202ENST00000318007 MT-CO2P00403 227 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 CRYGCP07315 174 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 LYL1P12980 280 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 C19orf54Q5BKX5 351 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 ACY3Q96HD9 319 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 RNF114Q9Y508 228 aa12.02□□□□□ -0.49
PDLIM5-202ENST00000318007 NDUFB8O95169 186 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 RPLP1P05386 114 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 SULT1A1P50225 295 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 TAS2R30P59541 319 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 TMEM65Q6PI78 240 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 OR5AU1Q8NGC0 362 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 OR10P1Q8NGE3 313 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 IGLV11-55A0A075B6I3 123 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 PMS2P5A8MQ11 134 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 INS-IGF2F8WCM5 200 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 SLC35B1P78383 322 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 CFHR3Q02985 330 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 SLC38A11Q08AI6 406 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 ZNF114Q8NC26 417 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 SLC25A31Q9H0C2 315 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 ARL6Q9H0F7 186 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 FBXL17Q9UF56 701 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 HSPB11Q9Y547 144 aa12.01□□□□□ -0.49
PDLIM5-202ENST00000318007 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
PDLIM5-202ENST00000318007 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
PDLIM5-202ENST00000318007 OR4F5Q8NH21 305 aa12□□□□□ -0.49
PDLIM5-202ENST00000318007 A0A1W2PRX2 142 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 RAB9AP51151 201 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 KRTAP24-1Q3LI83 254 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 SCARB1Q8WTV0 552 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 AQP10Q96PS8 301 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 GON7Q9BXV9 100 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 K7EIM0 57 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 ACSM6Q6P461 480 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 TEX38Q6PEX7 206 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 SLC16A13Q7RTY0 426 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 OR1S2Q8NGQ3 325 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 TMEM68Q96MH6 324 aa11.99□□□□□ -0.49
PDLIM5-202ENST00000318007 IGHV3-35A0A0C4DH35 117 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 HMSDA8MTL9 139 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 PRSS46E5RG02 174 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 IGLV1-40P01703 118 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 IGHG4P01861 327 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 CD28P10747 220 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 PSMB8P28062 276 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 RND2P52198 227 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 WFDC1Q9HC57 220 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 OR2T8A6NH00 312 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 I3L2K1 104 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 HBG1P69891 147 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 HBG2P69892 147 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 CD69Q07108 199 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 GAMTQ14353 236 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 TCTEX1D4Q5JR98 221 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 LAMTOR1Q6IAA8 161 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 LURAP1LQ8IV03 231 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 NPIPB3Q92617 1050 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 C16orf95Q9H693 158 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms