RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 WT1-ASQ06250 92 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 ACOT6Q3I5F7 207 aaPredicted RBP12.55□□□□□ -0.4
CALR-201ENST00000316448 Q5PR19 223 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 MALSU1Q96EH3 234 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 RNF5Q99942 180 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 SLC39A9Q9NUM3 307 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 HIF1ANQ9NWT6 349 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 B4DSR2 109 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 NUPL2O15504 423 aaKnown RBP12.54□□□□□ -0.4
CALR-201ENST00000316448 MOSP00540 346 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 OR13C7P0DN81 318 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 IGHV4-38-2P0DP08 117 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 Q8N6K4 173 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
CALR-201ENST00000316448 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 YIF1AO95070 293 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 EBI3Q14213 229 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 BRD3OSQ6XYD6 125 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 NPBQ8NG41 125 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 RXFP4Q8TDU9 374 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 RAB24Q969Q5 203 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
CALR-201ENST00000316448 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 IGHV1-69DA0A0B4J2H0 117 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 IGHV1-69P01742 117 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 HES1Q14469 280 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 MMDQ15546 238 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 TNXAQ16473 311 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 MLANAQ16655 118 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 KLF17Q5JT82 389 aaPredicted RBP12.53□□□□□ -0.4
CALR-201ENST00000316448 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 TMEM88Q6PEY1 159 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 MMD2Q8IY49 270 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 MBD6Q96DN6 1003 aa12.53□□□□□ -0.4
CALR-201ENST00000316448 CYB5BO43169 146 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.4
CALR-201ENST00000316448 NDUFA3O95167 84 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 DEFA4P12838 97 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.4
CALR-201ENST00000316448 ERHP84090 104 aaKnown RBP12.52□□□□□ -0.4
CALR-201ENST00000316448 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.4
CALR-201ENST00000316448 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 C19orf35Q6ZS72 473 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 CSMD1Q96PZ7 3565 aa12.52□□□□□ -0.4
CALR-201ENST00000316448 NBR2O15453 112 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 IFNA1P01562 189 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 APELAP0DMC3 54 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 GNB1P62873 340 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 TMEM249Q2WGJ8 235 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 LINC01356Q8N9X3 169 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 VAX2Q9UIW0 290 aa12.52□□□□□ -0.41
CALR-201ENST00000316448 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 TSPAN4O14817 238 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 HMGB3O15347 200 aaKnown RBP12.51□□□□□ -0.41
CALR-201ENST00000316448 REG1AP05451 166 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 FBP1P09467 338 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 MAS1LP35410 378 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
CALR-201ENST00000316448 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
CALR-201ENST00000316448 COMPP49747 757 aaPredicted RBP12.51□□□□□ -0.41
CALR-201ENST00000316448 PRR20EP86478 221 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 PRR20CP86479 221 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 PRR20DP86480 221 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 PRR20BP86481 221 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 PRR20AP86496 221 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 CD69Q07108 199 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 Q96MF0 132 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 P2RX4Q99571 388 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 PRRC2AP48634 2157 aaKnown RBP12.51□□□□□ -0.41
CALR-201ENST00000316448 CELSR1Q9NYQ6 3014 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 NAV3Q8IVL0 2385 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 CR1P17927 2039 aa12.51□□□□□ -0.41
CALR-201ENST00000316448 IGKV1OR2-108A0A075B7D4 117 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 TRAV20A0A0B4J274 112 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 A0A0U1RQK1 487 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 AREGP15514 252 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 B2MP61769 119 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 RAB31Q13636 194 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 STPG3Q8N7X2 389 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
CALR-201ENST00000316448 CACNG8Q8WXS5 425 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
CALR-201ENST00000316448 TAGLN2P37802 199 aaKnown RBP12.5□□□□□ -0.41
CALR-201ENST00000316448 MFAP2P55001 183 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 GAMTQ14353 236 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms