RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 FAM223AQ8IWN6 122 aa9.82□□□□□ -0.84
CHMP2A-201ENST00000312547 USMG5Q96IX5 58 aa9.82□□□□□ -0.84
CHMP2A-201ENST00000312547 UBE2E2Q96LR5 201 aa9.82□□□□□ -0.84
CHMP2A-201ENST00000312547 OR4C12Q96R67 309 aa9.82□□□□□ -0.84
CHMP2A-201ENST00000312547 FBXL7Q9UJT9 491 aa9.82□□□□□ -0.84
CHMP2A-201ENST00000312547 LSM5Q9Y4Y9 91 aaKnown RBP9.82□□□□□ -0.84
CHMP2A-201ENST00000312547 A0A1B0GVG6 124 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 TCRBV4S1A1TA0A5B7 111 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 I3L2K1 104 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 K7EIM0 57 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 TSC22D2O75157 780 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 DEDDO75618 318 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 IFNA10P01566 189 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 CDX1P47902 265 aaPredicted RBP9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 S100A10P60903 97 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 RAP2BP61225 183 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 DEFA5Q01523 94 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 NOXA1Q86UR1 476 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 RNASEH2CQ8TDP1 164 aaKnown RBP9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 RNF126Q9BV68 326 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 GNB4Q9HAV0 340 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 PSENENQ9NZ42 101 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 THYN1Q9P016 225 aa9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 TSSC4Q9Y5U2 329 aaPredicted RBP9.81□□□□□ -0.84
CHMP2A-201ENST00000312547 TRAV14DV4A0A0A6YYC5 116 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 A0A0G2JLM5 398 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 H3BP45 60 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 CORTO00230 105 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 MPC2O95563 127 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 RPP30P78346 268 aaKnown RBP9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 C15orf32Q32M92 178 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 LRRC37A5PQ49AS3 106 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 SPANXN5Q5MJ07 72 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 C18orf65Q6ZTR6 163 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 NDUFA11Q86Y39 141 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 VN1R17PQ8TDU5 208 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 OR5AC2Q9NZP5 309 aa9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 STRAPQ9Y3F4 350 aaKnown RBP9.8□□□□□ -0.84
CHMP2A-201ENST00000312547 PMS2P5A8MQ11 134 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 PRSS46E5RG02 174 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 G3V3Q6 166 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 L7N2F9 121 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 MT-CO2P00403 227 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 RLN2P04090 185 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 LYL1P12980 280 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 PVALBP20472 110 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 VAMP2P63027 116 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 RUNX1Q01196 453 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 EXOSC2Q13868 293 aaKnown RBP9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 Q5BKY6 102 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 ZNF343Q6P1L6 599 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 PRSS54Q6PEW0 395 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 SHISA2Q6UWI4 295 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 SCARB1Q8WTV0 552 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 MISP3Q96FF7 219 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 CXorf58Q96LI9 332 aa9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 FNDC4Q9H6D8 234 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 LYRM2Q9NU23 88 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-201ENST00000312547 hCG_2014768A0A024R1R8 64 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 E5RGE8 158 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 I3L521 148 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 PET100P0DJ07 73 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 BCAP31P51572 246 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 RAB11AP62491 216 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 KHDC1LQ5JSQ8 128 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 ETV3LQ6ZN32 361 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 ZNF502Q8TBZ5 544 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 C4orf3Q8WVX3 66 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 ATP6V0BQ99437 205 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 MBD2Q9UBB5 411 aa9.78□□□□□ -0.84
CHMP2A-201ENST00000312547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 TRBV7-1A0A0A6YYK4 115 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 IGHV3-21A0A0B4J1V1 117 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 FAM24AA6NFZ4 105 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 IFNA4P05014 189 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 OR8U8P0C7N1 319 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 METTL15P1P0C7V9 234 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 P2RY1P47900 373 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 CAV2P51636 162 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 CD69Q07108 199 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 FGL1Q08830 312 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 MLANAQ16655 118 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 HAPLN4Q86UW8 402 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 TMEM252Q8N6L7 170 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 KLHL30-AS1Q8NEE0 82 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 OR2T35Q8NGX2 323 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 PINX1Q96BK5 328 aaKnown RBP9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 ST6GAL2Q96JF0 529 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms