RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 ATP5G3P48201 142 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 CD69Q07108 199 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 ICAM4Q14773 271 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 DPF1Q92782 380 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 C5orf42Q9H799 3197 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 IGKV1-39P01597 117 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 IGHV3-23P01764 117 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 IGKV1D-39P04432 117 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 IER3P46695 156 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
PAAF1-201ENST00000310571 TGIF2-C20orf24A0A0A6YYL0 155 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-201ENST00000310571 BMPR1BO00238 502 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 NHLRC2Q8NBF2 726 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 CLEC5AQ9NY25 188 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 IGHV1-3A0A0C4DH29 117 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 C17orf58Q2M2W7 97 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 PMCHP20382 165 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 MAS1LP35410 378 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 SLC35B1P78383 322 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 SPRNQ5BIV9 151 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 ITGB1BP1O14713 200 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 GRNP28799 593 aaKnown RBP11.19□□□□□ -0.62
PAAF1-201ENST00000310571 TPPP2P59282 170 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 AUP1Q9Y679 476 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 PIEZO1Q92508 2521 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 DOCK11Q5JSL3 2073 aa11.19□□□□□ -0.62
PAAF1-201ENST00000310571 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 TMEM50AO95807 157 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 TRGC2P03986 189 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
PAAF1-201ENST00000310571 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 PIEZO2Q9H5I5 2752 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 CRISP2P16562 243 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
PAAF1-201ENST00000310571 TEX36Q5VZQ5 186 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 HIST1H2BAQ96A08 127 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 FAM162BQ5T6X4 162 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 NAGKQ9UJ70 344 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 DEFA6Q01524 100 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 MBD3L1Q8WWY6 194 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 RABAC1Q9UI14 185 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 COL4A2P08572 1712 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.62
PAAF1-201ENST00000310571 FAM208BQ5VWN6 2430 aa11.18□□□□□ -0.62
PAAF1-201ENST00000310571 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
PAAF1-201ENST00000310571 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 KRTDAPP60985 99 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 PMS2P11Q13670 270 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 METTL26Q96S19 204 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 FBXL7Q9UJT9 491 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 IGF2RP11717 2491 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 CD5P06127 495 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 PRSS8Q16651 343 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 VMO1Q7Z5L0 202 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 TMEM167AQ8TBQ9 72 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 NCOR1P1Q9H4R4 102 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 SRD5A3Q9H8P0 318 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 C15orf62A8K5M9 175 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 ATP5G2Q06055 141 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 EFNB3Q15768 340 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 GBGT1Q8N5D6 347 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
PAAF1-201ENST00000310571 C21orf62Q9NYP8 219 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 SCO2A0A1W2PP80 73 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 J3KRW8 73 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 ORM1P02763 201 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 AGAP20933 346 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
PAAF1-201ENST00000310571 GGTLC1Q9BX51 225 aa11.17□□□□□ -0.62
PAAF1-201ENST00000310571 MMP23AO75900 390 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 TDGF1P3P51864 188 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 ZNF134P52741 427 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 COX19Q49B96 90 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 TGFAP01135 160 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 NBEAP1P0C6P0 100 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 TPTE2P1Q5T6R2 138 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 RNASEKQ6P5S7 137 aaKnown RBP11.16□□□□□ -0.62
PAAF1-201ENST00000310571 OR2D3Q8NGH3 330 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 CHD9Q3L8U1 2897 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 TMEM8BA6NDV4 472 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 ZNF253O75346 499 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 Q8NA96 180 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 PHOX2AO14813 284 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-201ENST00000310571 MFAP2P55001 183 aa11.16□□□□□ -0.62
PAAF1-201ENST00000310571 PAX9P55771 341 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms