RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 METTL1Q9UBP6 276 aaKnown RBP18■□□□□ 0.47
PDLIM2-202ENST00000308354 CELSR2Q9HCU4 2923 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 IGHV2-70DA0A0C4DH43 119 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 GNB1P62873 340 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 TNXAQ16473 311 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 ZNF674Q2M3X9 581 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 BSXQ3C1V8 233 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 RNF212Q495C1 297 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 SIRPDQ9H106 197 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 SIGLEC9Q9Y336 463 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 CENPEQ02224 2701 aa18■□□□□ 0.47
PDLIM2-202ENST00000308354 GOSR1O95249 250 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 ATP5J2P56134 94 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 ERHP84090 104 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 PRSS8Q16651 343 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 FBLN7Q53RD9 439 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 C2orf83Q53S99 150 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 C1orf122Q6ZSJ8 110 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 DYNAPQ8N1N2 210 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 TEX45Q8NA69 505 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 RPUSD4Q96CM3 377 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 SMIM7Q9BQ49 75 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 SDF2L1Q9HCN8 221 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 VENTXO95231 258 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 CRYGBP07316 175 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 PNRC1Q12796 327 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 KIR3DL3Q8N743 410 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 FAM168AQ92567 244 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 KCNIP2Q9NS61 270 aa17.99■□□□□ 0.47
PDLIM2-202ENST00000308354 TOX4O94842 621 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 CEACAM3P40198 252 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 ZNF343Q6P1L6 599 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 URGCP-MRPS24S4R325 110 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 TMEM250H0YL14 139 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 TSPAN9O75954 239 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 ACTL6BO94805 426 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 ARL14EPLP0DKL9 152 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 RAB5BP61020 215 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 RAB31Q13636 194 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 ABHD5Q8WTS1 349 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 CFHR4Q92496 578 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 PERPQ96FX8 193 aa17.98■□□□□ 0.47
PDLIM2-202ENST00000308354 A0A1W2PN81 502 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 C1orf196B1AJZ1 125 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 B4DEV8 164 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 FNDC10F2Z333 226 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 FCN1O00602 326 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 CHRNA7P36544 502 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 UBE2G2P60604 165 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 PPP1R27Q86WC6 154 aa17.97■□□□□ 0.47
PDLIM2-202ENST00000308354 IGHV4-61A0A0C4DH41 118 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 C11orf94C9JXX5 98 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 C19orf35Q6ZS72 473 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 MMD2Q8IY49 270 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 PARLQ9H300 379 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 IGKV1OR2-108A0A075B7D4 117 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 STAG3L2P0CL84 134 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 STAG3L3P0CL85 134 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 MAS1LP35410 378 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 RPL29P47914 159 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 PLGLAQ15195 96 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 MMDQ15546 238 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 TMEM249Q2WGJ8 235 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 TBX15Q96SF7 602 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 PIMREGQ9BSJ6 248 aa17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 SEPSECSQ9HD40 501 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-202ENST00000308354 IGHV3-48P01763 117 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 ATP5IP56385 69 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 LGALS4P56470 323 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 GAMTQ14353 236 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 HES1Q14469 280 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 ELOBQ15370 118 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 SPATA31B1PQ5VZV4 182 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 SPNS3Q6ZMD2 512 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 Q8WTZ3 238 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 NAT8Q9UHE5 227 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 FBN2P35556 2912 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 AREGP15514 252 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 PRR20EP86478 221 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 PRR20CP86479 221 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 PRR20DP86480 221 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 PRR20BP86481 221 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 PRR20AP86496 221 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 CYP2G1PQ6ZSU1 146 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 TMEM144Q7Z5S9 345 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 C10orf105Q8TEF2 133 aa17.95■□□□□ 0.46
PDLIM2-202ENST00000308354 RPL27AP46776 148 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 BIN3Q9NQY0 253 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 IGHV4-30-2A0A087WSY4 118 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 IGLC7A0M8Q6 106 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 LINC00869P0C866 280 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 ATP5G3P48201 142 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 COMPP49747 757 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 ADIRFQ15847 76 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 TMEM241Q24JQ0 296 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 CST9LP1Q5W188 147 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 OR51G1Q8NGK1 321 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 OR2T6Q8NHC8 308 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 ABCA2Q9BZC7 2435 aa17.94■□□□□ 0.46
PDLIM2-202ENST00000308354 CELSR1Q9NYQ6 3014 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms