RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
PTPN9-201ENST00000306726 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
PTPN9-201ENST00000306726 C2CD3Q4AC94 2353 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 DNPH1O43598 174 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 COX7A2P2O60397 106 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 CECR9P0C854 216 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 PLGLAQ15195 96 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 Q8IYB0 196 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 MDS2Q8NDY4 140 aa12.04□□□□□ -0.48
PTPN9-201ENST00000306726 EXPH5Q8NEV8 1989 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 BRS3P32247 399 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 ZNF134P52741 427 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 WDR82Q6UXN9 313 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 ACP7Q6ZNF0 438 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 CD177Q8N6Q3 437 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 NEU1Q99519 415 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 RNF114Q9Y508 228 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 OR51B2Q9Y5P1 312 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 ARHGAP32A7KAX9 2087 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 SLC25A5P05141 298 aaKnown RBP12.03□□□□□ -0.48
PTPN9-201ENST00000306726 UQCRFS1P47985 274 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 ZNF841Q6ZN19 808 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 TCF24Q7RTU0 167 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 WFDC8Q8IUA0 241 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 IGHV3-35A0A0C4DH35 117 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 WT1P19544 449 aaPredicted RBP12.03□□□□□ -0.48
PTPN9-201ENST00000306726 FAM168AQ92567 244 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 WASHC3Q9Y3C0 194 aa12.03□□□□□ -0.48
PTPN9-201ENST00000306726 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
PTPN9-201ENST00000306726 SERTM2A0A1B0GWG4 89 aa12.02□□□□□ -0.48
PTPN9-201ENST00000306726 K7EN84 100 aa12.02□□□□□ -0.48
PTPN9-201ENST00000306726 ZNF596Q8TC21 504 aa12.02□□□□□ -0.48
PTPN9-201ENST00000306726 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.48
PTPN9-201ENST00000306726 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 RAB29O14966 203 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 APCSP02743 223 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 IGKV1-16P04430 117 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 OR4C5Q8NGB2 326 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.49
PTPN9-201ENST00000306726 OR8B2Q96RD0 313 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 CXXC4Q9H2H0 198 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 BRWD1-AS2P59051 145 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 PKIBQ9C010 78 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 WDR83OSQ9Y284 106 aa12.02□□□□□ -0.49
PTPN9-201ENST00000306726 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
PTPN9-201ENST00000306726 C1orf194Q5T5A4 169 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 FDCSPQ8NFU4 85 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 LPAR2Q9HBW0 351 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 LOC389332A0A1B0GUA5 103 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 GGCTO75223 188 aaKnown RBP12.01□□□□□ -0.49
PTPN9-201ENST00000306726 LINC00869P0C866 280 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 NPIPB3Q92617 1050 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
PTPN9-201ENST00000306726 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 RNF2Q99496 336 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 KCNIP2Q9NS61 270 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 ANKHD1Q8IWZ3 2542 aaKnown RBP12.01□□□□□ -0.49
PTPN9-201ENST00000306726 DPRXA6NFQ7 191 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 CCL3L1P16619 93 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 RAXQ9Y2V3 346 aa12.01□□□□□ -0.49
PTPN9-201ENST00000306726 SELENOVP59797 346 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 COL12A1Q99715 3063 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 FBLL1A6NHQ2 334 aaKnown RBP12□□□□□ -0.49
PTPN9-201ENST00000306726 DLEU1O43261 78 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 HARBI1Q96MB7 349 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 CALYQ9NYX4 217 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 CORTO00230 105 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 TBR1Q16650 682 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 SLC35E1Q96K37 410 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 IL36BQ9NZH7 164 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 CHD8Q9HCK8 2581 aa12□□□□□ -0.49
PTPN9-201ENST00000306726 RPRMLQ8N4K4 120 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 STPG4Q8N801 248 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 PCSK5Q92824 1860 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 SAA2-SAA4A0A096LPE2 208 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 TRGV10A0A0A0MS01 117 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 MMP23AO75900 390 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 SAA2P0DJI9 122 aaPredicted RBP11.99□□□□□ -0.49
PTPN9-201ENST00000306726 MAS1LP35410 378 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 COL5A1-AS1Q5SY13 56 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 CRYABP02511 175 aaKnown RBP11.99□□□□□ -0.49
PTPN9-201ENST00000306726 MIEN1Q9BRT3 115 aa11.99□□□□□ -0.49
PTPN9-201ENST00000306726 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 SORL1Q92673 2214 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 TRAV8-1A0A0A6YYK1 113 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 TM4SF20Q53R12 229 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 FAM214BQ7L5A3 538 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 C9orf106Q8NAJ2 232 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 IL19Q9UHD0 177 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 MORN2Q502X0 79 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms