RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 AKR1C1Q04828 323 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 ETFRF1Q6IPR1 90 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 BCL6BQ8N143 479 aaPredicted RBP13.88□□□□□ -0.19
KRT28-201ENST00000306658 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
KRT28-201ENST00000306658 NPCDR1Q9BY65 106 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 FBXO7Q9Y3I1 522 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 RFNGQ9Y644 331 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 DEFA4P12838 97 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 CTRB1P17538 263 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 OPRK1P41145 380 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 RAB31Q13636 194 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 LY6EQ16553 131 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 CTRB2Q6GPI1 263 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 TEPPQ6URK8 271 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 C16orf82Q7Z2V1 217 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 C22orf15Q8WYQ4 148 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 SLC35E1Q96K37 410 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 WNT10AQ9GZT5 417 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 PFDN2Q9UHV9 154 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 SOX15O60248 233 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 CAMLGP49069 296 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 GAMTQ14353 236 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 SLC16A13Q7RTY0 426 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 TMEM144Q7Z5S9 345 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 MISP3Q96FF7 219 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 CXorf58Q96LI9 332 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 PARP11Q9NR21 331 aa13.87□□□□□ -0.19
KRT28-201ENST00000306658 MDFIC2A0A1B0GVS7 189 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 NPIPB5A8MRT5 1133 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 CYB5BO43169 146 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 CRYGCP07315 174 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 NDPQ00604 133 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 TTC9CQ8N5M4 171 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 HSPB9Q9BQS6 159 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 MED9Q9NWA0 146 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 LSM4Q9Y4Z0 139 aaKnown RBP13.86□□□□□ -0.19
KRT28-201ENST00000306658 NOTCH2Q04721 2471 aa13.86□□□□□ -0.19
KRT28-201ENST00000306658 CD5LO43866 347 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 ATP6V1G1O75348 118 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 MFAP2P55001 183 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 MLANAQ16655 118 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 PXDC1Q5TGL8 231 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 Q6ZRG5 221 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 LFNGQ8NES3 379 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 OR5R1Q8NH85 324 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 KCNIP2Q9NS61 270 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 BTBD17A6NE02 478 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 MBP02144 154 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 EGR2P11161 476 aaPredicted RBP13.85□□□□□ -0.19
KRT28-201ENST00000306658 IER3P46695 156 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 FAM213BQ8TBF2 198 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 TMEM68Q96MH6 324 aa13.85□□□□□ -0.19
KRT28-201ENST00000306658 FNDC4Q9H6D8 234 aaPredicted RBP13.85□□□□□ -0.19
KRT28-201ENST00000306658 TLN2Q9Y4G6 2542 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 AMY1AP04745 511 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 FHITP49789 147 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 ZNF616Q08AN1 781 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 C19orf35Q6ZS72 473 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 COMMD7Q86VX2 200 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 OR2T6Q8NHC8 308 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 MGST2Q99735 147 aa13.84□□□□□ -0.19
KRT28-201ENST00000306658 MYO9AB2RTY4 2548 aa13.83□□□□□ -0.19
KRT28-201ENST00000306658 AGPAT2O15120 278 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 IGHV4-59P01825 116 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 ELLP55199 621 aaPredicted RBP13.83□□□□□ -0.2
KRT28-201ENST00000306658 TMEM41BQ5BJD5 291 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 Q6YL49 198 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 SPNS3Q6ZMD2 512 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 TMUB1Q9BVT8 246 aa13.83□□□□□ -0.2
KRT28-201ENST00000306658 AKIRIN2Q53H80 203 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 FFAR4Q5NUL3 377 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 UNQ5815/PRO19632Q6UWF5 114 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 GGTLC1Q9BX51 225 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 HRH4Q9H3N8 390 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 PRDM13Q9H4Q3 707 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 RPRMQ9NS64 109 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 DMRT1Q9Y5R6 373 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 SH2D7A6NKC9 451 aaPredicted RBP13.82□□□□□ -0.2
KRT28-201ENST00000306658 NUDT19A8MXV4 375 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 MT-CO2P00403 227 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 RPL29P47914 159 aaKnown RBP13.82□□□□□ -0.2
KRT28-201ENST00000306658 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 THYN1Q9P016 225 aa13.82□□□□□ -0.2
KRT28-201ENST00000306658 TSPAN15O95858 294 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 H2AFB1P0C5Y9 115 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 SRP14P37108 136 aaKnown RBP13.81□□□□□ -0.2
KRT28-201ENST00000306658 RND2P52198 227 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 KRTAP1-1Q07627 177 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 ECSCRQ19T08 205 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 ACOT6Q3I5F7 207 aaPredicted RBP13.81□□□□□ -0.2
KRT28-201ENST00000306658 C9orf152Q5JTZ5 239 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 ACSM6Q6P461 480 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 OR5T1Q8NG75 326 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 LYPD6BQ8NI32 183 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms