RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 OR5AC1P0C628 307 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 SNCAP37840 140 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 MFAP4P55083 255 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 DHODHQ02127 395 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 SLC16A13Q7RTY0 426 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 FAM219AQ8IW50 185 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 CHRDL1Q9BU40 450 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 GPR132Q9UNW8 380 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 TENM3Q9P273 2699 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 TRAV25A0A0B4J276 109 aa19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 NUPL2O15504 423 aaKnown RBP19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 FCGR2BP31994 310 aaPredicted RBP19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 RELQ04864 619 aaPredicted RBP19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 ANKRD55Q3KP44 614 aa19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 SPINK9Q5DT21 86 aa19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 RBPMS2Q6ZRY4 209 aaKnown RBP19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 SCGB3A2Q96PL1 93 aa19.89■□□□□ 0.77
CDKN2A-201ENST00000304494 CRYM-AS1A6NIL9 109 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 MT-CO2P00403 227 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 ADMP35318 185 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 HAGHQ16775 308 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 GLYATL2Q8WU03 294 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 RBPMSQ93062 196 aaKnown RBP19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 PINX1Q96BK5 328 aaKnown RBP19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 SPATA25Q9BR10 227 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 ENY2Q9NPA8 101 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 SELENOKQ9Y6D0 94 aa19.88■□□□□ 0.77
CDKN2A-201ENST00000304494 OR11H12B2RN74 326 aa19.87■□□□□ 0.77
CDKN2A-201ENST00000304494 CTSGP08311 255 aa19.87■□□□□ 0.77
CDKN2A-201ENST00000304494 SUB1P53999 127 aaKnown RBP eCLIP19.87■□□□□ 0.77
CDKN2A-201ENST00000304494 C20orf24Q9BUV8 137 aa19.87■□□□□ 0.77
CDKN2A-201ENST00000304494 MCUBQ9NWR8 336 aa19.87■□□□□ 0.77
CDKN2A-201ENST00000304494 K7EMT4 169 aa19.86■□□□□ 0.77
CDKN2A-201ENST00000304494 SCAF4O95104 1147 aaKnown RBP19.86■□□□□ 0.77
CDKN2A-201ENST00000304494 S100A5P33763 92 aa19.86■□□□□ 0.77
CDKN2A-201ENST00000304494 HOXA1P49639 335 aaPredicted RBP19.86■□□□□ 0.77
CDKN2A-201ENST00000304494 DEFB125Q8N687 156 aa19.86■□□□□ 0.77
CDKN2A-201ENST00000304494 OR52B4Q8NGK2 314 aa19.86■□□□□ 0.77
CDKN2A-201ENST00000304494 A0A0G2JRQ6 117 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 C15orf62A8K5M9 175 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 CORTO00230 105 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 FAUP35544 74 aaKnown RBP19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 ETV6P41212 452 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 SRD5A3Q9H8P0 318 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 KCNIP3Q9Y2W7 256 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 STAB2Q8WWQ8 2551 aa19.85■□□□□ 0.77
CDKN2A-201ENST00000304494 C3orf84H3BNL1 204 aa19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 GNG7O60262 68 aa19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 AARDQ4LEZ3 155 aa19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 PYDC2Q56P42 97 aa19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 TMEM268Q5VZI3 342 aa19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 LINC00322Q6ZN03 302 aaPredicted RBP19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 SELENOHQ8IZQ5 122 aaKnown RBP19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 LHFPL5Q8TAF8 219 aa19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 KMT2CQ8NEZ4 4911 aaKnown RBP19.84■□□□□ 0.77
CDKN2A-201ENST00000304494 AP3S2P59780 193 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 SPCS3P61009 180 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 LAMTOR1Q6IAA8 161 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 DUSP18Q8NEJ0 188 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 OR52E5Q8NH55 327 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 SPAG8Q99932 426 aaPredicted RBP19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 RBM38Q9H0Z9 239 aaKnown RBP19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 WFDC10AQ9H1F0 79 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 TMEM56-RWDD3S4R434 201 aa19.83■□□□□ 0.77
CDKN2A-201ENST00000304494 ZNF701M0R085 212 aaPredicted RBP19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 NPBWR1P48145 328 aa19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 PVRIGQ6DKI7 326 aa19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 Q6ZRM9 215 aa19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 IL22RA2Q969J5 263 aa19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 GALNT14Q96FL9 552 aa19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 CITED4Q96RK1 184 aa19.82■□□□□ 0.76
CDKN2A-201ENST00000304494 IGHV3OR16-8A0A075B7F1 116 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 TSPAN4O14817 238 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 YIF1AO95070 293 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 IGHV3-48P01763 117 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 RNASE2P10153 161 aaKnown RBP19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 TOMM5Q8N4H5 51 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 MUC7Q8TAX7 377 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 CACNG5Q9UF02 275 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 CACFD1Q9UGQ2 172 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 V9GYH0 126 aa19.81■□□□□ 0.76
CDKN2A-201ENST00000304494 ZNF207O43670 478 aaKnown RBP19.8■□□□□ 0.76
CDKN2A-201ENST00000304494 KLF9Q13886 244 aaPredicted RBP19.8■□□□□ 0.76
CDKN2A-201ENST00000304494 TRIM63Q969Q1 353 aa19.8■□□□□ 0.76
CDKN2A-201ENST00000304494 TMEM230Q96A57 120 aa19.8■□□□□ 0.76
CDKN2A-201ENST00000304494 OR10C1Q96KK4 312 aa19.8■□□□□ 0.76
CDKN2A-201ENST00000304494 RBMY1BA6NDE4 496 aaKnown RBP19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 RBMY1EA6NEQ0 496 aaKnown RBP19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 RBMY1DP0C7P1 496 aaKnown RBP19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 AKR1C4P17516 323 aa19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 TMEM187Q14656 261 aa19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 DEDD2Q8WXF8 326 aa19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 GPR146Q96CH1 333 aa19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 DNAH7Q8WXX0 4024 aa19.79■□□□□ 0.76
CDKN2A-201ENST00000304494 ANXA3P12429 323 aa19.78■□□□□ 0.76
CDKN2A-201ENST00000304494 HTR2BP41595 481 aa19.78■□□□□ 0.76
CDKN2A-201ENST00000304494 BSXQ3C1V8 233 aa19.78■□□□□ 0.76
CDKN2A-201ENST00000304494 SMPXQ9UHP9 88 aa19.78■□□□□ 0.76
CDKN2A-201ENST00000304494 OPRK1P41145 380 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms