RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 NPDC1Q9NQX5 325 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-201ENST00000302528 KBTBD11-OT1A0A1B0GTJ5 212 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 EVI2AP22794 236 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 H2BFSP57053 126 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 SLC25A38Q96DW6 304 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 SRXN1Q9BYN0 137 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 TRAV8-1A0A0A6YYK1 113 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 SERF1AO75920 110 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 TRBV5-3A0A0A0MS03 114 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 TRAV14DV4A0A0A6YYC5 116 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ZNF708P17019 499 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-201ENST00000302528 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ACP7Q6ZNF0 438 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-201ENST00000302528 TRBV5-7A0A0A0MS05 114 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 PPIFP30405 207 aaKnown RBP8.74□□□□□ -1.01
CLIP1-201ENST00000302528 GNG5P63218 68 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ITGB1BP1O14713 200 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ESDP10768 282 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 GLRXP35754 106 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 FAM216BQ8N7L0 139 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 CACNG8Q8WXS5 425 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 PQLC2LA1A4F0 135 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 C12orf77C9JDV5 145 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 HOXD3P31249 432 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-201ENST00000302528 DEFB121Q5J5C9 76 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 GGTLC1Q9BX51 225 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 ATP1A1-AS1Q5TC04 95 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 THSD7AQ9UPZ6 1657 aa8.74□□□□□ -1.01
CLIP1-201ENST00000302528 J3QW42 95 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 PPBPP02775 128 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 LIMS1P48059 325 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 NR2C2APQ86WQ0 139 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 RNASE7Q9H1E1 156 aaKnown RBP8.73□□□□□ -1.01
CLIP1-201ENST00000302528 C17orf98A8MV24 154 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 ASPHD2Q6ICH7 369 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 C11orf44Q8N8P7 122 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 WFDC12Q8WWY7 111 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 ERVH48-1M5A8F1 160 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 RBMY1FQ15415 496 aaKnown RBP8.73□□□□□ -1.01
CLIP1-201ENST00000302528 GTF3AQ92664 365 aaKnown RBP8.73□□□□□ -1.01
CLIP1-201ENST00000302528 METRNQ9UJH8 293 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 TRAV9-2A0A087WT02 112 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 NBR2O15453 112 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 FAM201AQ5SY85 155 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 Q6ZT83 130 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 LY75O60449 1722 aa8.73□□□□□ -1.01
CLIP1-201ENST00000302528 TMEM8BA6NDV4 472 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 NHLRC3Q5JS37 347 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 ANKRD31Q8N7Z5 1873 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
CLIP1-201ENST00000302528 CD33P20138 364 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 FAM27E3Q08E93 113 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 ERVK11-1P61568 191 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 C2orf82Q6UX34 121 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 SIPA1L1O43166 1804 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 NPIPB13A6NJU9 1138 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 NPIPB5A8MRT5 1133 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 HSD52Q0P140 79 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 SMRP1Q8NCR6 262 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 LILRA1O75019 489 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 ADMP35318 185 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 ZP1P60852 638 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 C1orf122Q6ZSJ8 110 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 RASL10AQ92737 203 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 RNF125Q96EQ8 232 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
CLIP1-201ENST00000302528 TRAV5A0A0B4J249 113 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 WISP3O95389 354 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-201ENST00000302528 EPDR1Q9UM22 224 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 COL11A2P13942 1736 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-201ENST00000302528 ZNFX1Q9P2E3 1918 aaKnown RBP8.71□□□□□ -1.01
CLIP1-201ENST00000302528 MCM3APO60318 1980 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 IFITM3Q01628 133 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-201ENST00000302528 DTX1Q86Y01 620 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.01
CLIP1-201ENST00000302528 LINC01549A6NIU2 74 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 TMEM14DPA8MWL7 114 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 CD160O95971 181 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 BSPH1Q075Z2 132 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 PSG8Q9UQ74 426 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 LOC102723996A0A087X1L8 192 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 COX6A1P12074 109 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 SRD5A1P18405 259 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 FOXL1Q12952 345 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 NRXN2Q9P2S2 1712 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms