RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TMPRSS3P57727 454 aa6.46□□□□□ -1.38
SF3B3-201ENST00000302516 APOMO95445 188 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 STARD6P59095 220 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 RPL23P62829 140 aaKnown RBP6.45□□□□□ -1.38
SF3B3-201ENST00000302516 FAM166AQ6J272 317 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 SSBP3Q9BWW4 388 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-201ENST00000302516 IGKV3-7A0A075B6H7 116 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 CD5P06127 495 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 RNASE1P07998 156 aaKnown RBP6.45□□□□□ -1.38
SF3B3-201ENST00000302516 PF4V1P10720 104 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 ERVK11-1P61568 191 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 FAM74A4Q5TZK3 123 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 TPRX1Q8N7U7 411 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 BEX4Q9NWD9 120 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-201ENST00000302516 J3QRE1 110 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 PLNP26678 52 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 CNTFRP26992 372 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 SRSF1Q07955 248 aaKnown RBP eCLIP6.45□□□□□ -1.389e-6■□□□□ 8.7
SF3B3-201ENST00000302516 DNASE2BQ8WZ79 361 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 TRBV6-7A0A0A0MS04 114 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 NPIPB3Q92617 1050 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 THY1P04216 161 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 IGHV1-69-2A0A0G2JMI3 117 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 C9orf172C9J069 976 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 GREM1O60565 184 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 FOXH1O75593 365 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 PCOLCEQ15113 449 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF826PQ6ZT77 177 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 SLC25A48Q6ZT89 311 aaKnown RBP6.45□□□□□ -1.38
SF3B3-201ENST00000302516 TIMP4Q99727 224 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 KLK15Q9H2R5 256 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 SEMA5BQ9P283 1151 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 A0A1W2PRD5 423 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 A0A1W2PRF3 423 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 A0A1W2PRM7 423 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 REG1AP05451 166 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 GLRXP35754 106 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 FAM71F2Q6NXP2 309 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 LINC00587B1AMM8 73 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 FOXL1Q12952 345 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF497Q6ZNH5 498 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 TMEM144Q7Z5S9 345 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 RNF182Q8N6D2 247 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 LY96Q9Y6Y9 160 aa6.45□□□□□ -1.38
SF3B3-201ENST00000302516 OBSL1O75147 1896 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 MOSP00540 346 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 OR5AN1Q8NGI8 311 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 ARPC1AQ92747 370 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 C9JCJ5 164 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 RPL39P5Q59GN2 51 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF71Q9NQZ8 489 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-201ENST00000302516 IQCF6A8MYZ5 107 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 TNFSF13O75888 250 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 C1QCP02747 245 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 ADMP35318 185 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 NUP37Q8NFH4 326 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 CHCHD2Q9Y6H1 151 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-201ENST00000302516 YPEL1O60688 119 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 ACTL10Q5JWF8 245 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 YPEL2Q96QA6 119 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 WBP1LQ9NX94 342 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 IGFBP2P18065 325 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 ZXDCQ2QGD7 858 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-201ENST00000302516 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 REPIN1Q9BWE0 567 aaKnown RBP6.44□□□□□ -1.38
SF3B3-201ENST00000302516 CGB1A6NKQ9 187 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 C12orf77C9JDV5 145 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 SLC25A20O43772 301 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 PILRBQ9UKJ0 227 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 MSGN1A6NI15 193 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 TSKUQ8WUA8 353 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 C21orf62Q9NYP8 219 aa6.44□□□□□ -1.38
SF3B3-201ENST00000302516 IGLV3-32A0A0A0MS00 114 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TCRBV4S1A1TA0A5B7 111 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 CEACAM1P13688 526 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 SPINK2P20155 84 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 CD69Q07108 199 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 LY6G6FQ5SQ64 297 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 ORAOV1Q8WV07 137 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TRAV8-4A0A0B4J246 113 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 LOC101059948A0A1B0GTJ6 334 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 IFI27P40305 119 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-201ENST00000302516 PDLIM4P50479 330 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF585BQ52M93 769 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 RNF126Q9BV68 326 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 ZDBF2Q9HCK1 2354 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 PRR7Q8TB68 274 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TRAV24A0A0B4J272 114 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 MGST2Q99735 147 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 POLEQ07864 2286 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TANC1Q9C0D5 1861 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 ZFAND6Q6FIF0 208 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF784Q8NCA9 323 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-201ENST00000302516 SLC25A28Q96A46 364 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 NUDT11Q96G61 164 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms