RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 JTBO76095 146 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 VDAC2P45880 294 aaPredicted RBP16.54■□□□□ 0.24
SMCO4-201ENST00000298966 SULT1A1P50225 295 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 HBG1P69891 147 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 HBG2P69892 147 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 PLGLAQ15195 96 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 TMEM14EPQ6UXP3 125 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 SCARB1Q8WTV0 552 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 B9D2Q9BPU9 175 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 WNT10AQ9GZT5 417 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 HEYLQ9NQ87 328 aaPredicted RBP16.54■□□□□ 0.24
SMCO4-201ENST00000298966 NDUFA4L2Q9NRX3 87 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 PF4P02776 101 aa16.53■□□□□ 0.24
SMCO4-201ENST00000298966 NHLH2Q02577 135 aa16.53■□□□□ 0.24
SMCO4-201ENST00000298966 C5orf64Q2M2E5 130 aa16.53■□□□□ 0.24
SMCO4-201ENST00000298966 RCC1LQ96I51 464 aaKnown RBP16.53■□□□□ 0.24
SMCO4-201ENST00000298966 RITA1Q96K30 269 aa16.53■□□□□ 0.24
SMCO4-201ENST00000298966 PITPNC1Q9UKF7 332 aa16.53■□□□□ 0.24
SMCO4-201ENST00000298966 BORCS7-ASMTA0A0B4J1R7 106 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 DFFBO76075 338 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 KRTAP10-11P60412 298 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 RAB11AP62491 216 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 ERHP84090 104 aaKnown RBP16.52■□□□□ 0.24
SMCO4-201ENST00000298966 SPANXN5Q5MJ07 72 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 C16orf82Q7Z2V1 217 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 BAP18Q8IXM2 172 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 UBAC2Q8NBM4 344 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 FBXL15Q9H469 300 aa16.52■□□□□ 0.24
SMCO4-201ENST00000298966 HTR2BP41595 481 aa16.51■□□□□ 0.23
SMCO4-201ENST00000298966 RPL27AP46776 148 aaKnown RBP16.51■□□□□ 0.23
SMCO4-201ENST00000298966 ZNF266Q14584 549 aa16.51■□□□□ 0.23
SMCO4-201ENST00000298966 NDUFA5Q16718 116 aa16.51■□□□□ 0.23
SMCO4-201ENST00000298966 ATP6V1FQ16864 119 aa16.51■□□□□ 0.23
SMCO4-201ENST00000298966 RPL7L1Q6DKI1 246 aaKnown RBP16.51■□□□□ 0.23
SMCO4-201ENST00000298966 OR1S2Q8NGQ3 325 aa16.51■□□□□ 0.23
SMCO4-201ENST00000298966 PINX1Q96BK5 328 aaKnown RBP16.51■□□□□ 0.23
SMCO4-201ENST00000298966 BSCL2Q96G97 398 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-201ENST00000298966 ARV1Q9H2C2 271 aa16.51■□□□□ 0.23
SMCO4-201ENST00000298966 H3BP45 60 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 FGF16O43320 207 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 CNTFRP26992 372 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 HNF4GQ14541 408 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 MRGPRG-AS1Q2M3A8 158 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 TMEM219Q86XT9 240 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 SLC24A4Q8NFF2 622 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 SMIM3Q9BZL3 60 aa16.5■□□□□ 0.23
SMCO4-201ENST00000298966 A6NDX4 124 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 M0QZK8 103 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 CST7O76096 145 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 IFNA10P01566 189 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 SUB1P53999 127 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMCO4-201ENST00000298966 TNXAQ16473 311 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 EIF5AL1Q6IS14 154 aaKnown RBP16.49■□□□□ 0.23
SMCO4-201ENST00000298966 ALKAL2Q6UX46 152 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 OR5AU1Q8NGC0 362 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 OR5C1Q8NGR4 320 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 DPF1Q92782 380 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 OR4C12Q96R67 309 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 HINT2Q9BX68 163 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 WFDC1Q9HC57 220 aa16.49■□□□□ 0.23
SMCO4-201ENST00000298966 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
SMCO4-201ENST00000298966 HLA-DRB1P01911 266 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 OR8U8P0C7N1 319 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 NPY1RP25929 384 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 TMEM267Q0VDI3 215 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-201ENST00000298966 CLLU1Q5K131 121 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 ZNF562Q6V9R5 426 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 OR10P1Q8NGE3 313 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 RBM14Q96PK6 669 aaKnown RBP16.48■□□□□ 0.23
SMCO4-201ENST00000298966 ATP5SQ99766 215 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 RASL11BQ9BPW5 248 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 GGACTQ9BVM4 153 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 GPR61Q9BZJ8 451 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 TPSG1Q9NRR2 321 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 MOB4Q9Y3A3 225 aa16.48■□□□□ 0.23
SMCO4-201ENST00000298966 CA2P00918 260 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 METTL15P1P0C7V9 234 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 CD24P25063 80 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 HOXD3P31249 432 aaPredicted RBP16.47■□□□□ 0.23
SMCO4-201ENST00000298966 SNCAP37840 140 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 RAB14P61106 215 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 EGFEM1PQ0D2K5 195 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 BSXQ3C1V8 233 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 TMEM95Q3KNT9 176 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 C2orf83Q53S99 150 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 Q8N9W7 124 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 ZNF114Q8NC26 417 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 SRSF12Q8WXF0 261 aaKnown RBP16.47■□□□□ 0.23
SMCO4-201ENST00000298966 GINS3Q9BRX5 216 aa16.47■□□□□ 0.23
SMCO4-201ENST00000298966 DYNC2H1Q8NCM8 4307 aaKnown RBP16.46■□□□□ 0.23
SMCO4-201ENST00000298966 TCRBV4S1A1TA0A5B7 111 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 C15orf62A8K5M9 175 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 CNIH1O95406 144 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 SPINK9Q5DT21 86 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 HAPLN4Q86UW8 402 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 RBMXL1Q96E39 390 aaKnown RBP16.46■□□□□ 0.23
SMCO4-201ENST00000298966 SLC25A33Q9BSK2 321 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 PARD6GQ9BYG4 376 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-201ENST00000298966 SLC25A32Q9H2D1 315 aa16.46■□□□□ 0.23
SMCO4-201ENST00000298966 TSSC4Q9Y5U2 329 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms