RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 DYSFO75923 2080 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 IGHV1-69-2A0A0G2JMI3 117 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 HIGD1CA8MV81 97 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 ISLRO14498 428 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 CHEK1O14757 476 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 SLC25A34Q6PIV7 304 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 OR9G1Q8NH87 305 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 BCL2L2Q92843 193 aaPredicted RBP9.41□□□□□ -0.9
TRUB1-201ENST00000298746 TPPP3Q9BW30 176 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 ZNF891A8MT65 544 aaPredicted RBP9.4□□□□□ -0.9
TRUB1-201ENST00000298746 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 EBLN2Q6P2I7 272 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 Q8N976 141 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
TRUB1-201ENST00000298746 PCNX1Q96RV3 2341 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 OR2T8A6NH00 312 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 GGTLC3B5MD39 225 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 SLC25A5P05141 298 aaKnown RBP9.4□□□□□ -0.9
TRUB1-201ENST00000298746 PYYP10082 97 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
TRUB1-201ENST00000298746 MEOX1P50221 254 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 SSPNQ14714 243 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 TMEM249Q2WGJ8 235 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 WDR31Q8NA23 367 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 RND1Q92730 232 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.9
TRUB1-201ENST00000298746 UQCRFS1P47985 274 aa9.4□□□□□ -0.91
TRUB1-201ENST00000298746 MORN2Q502X0 79 aa9.4□□□□□ -0.91
TRUB1-201ENST00000298746 TCF24Q7RTU0 167 aa9.4□□□□□ -0.91
TRUB1-201ENST00000298746 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.91
TRUB1-201ENST00000298746 GSX1Q9H4S2 264 aaPredicted RBP9.4□□□□□ -0.91
TRUB1-201ENST00000298746 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.91
TRUB1-201ENST00000298746 IGHV2-26A0A0B4J1V2 119 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 H3BTX0 84 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 OR52E5Q8NH55 327 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 C11orf52Q96A22 123 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 MUC21A0A0G2JKD1 596 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 MUC21A0A140T8X8 626 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 CDKN1BP46527 198 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 TBR1Q16650 682 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 WDR82Q6UXN9 313 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 LHFPL4Q7Z7J7 247 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 NUP35Q8NFH5 326 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 SIT1Q9Y3P8 196 aa9.39□□□□□ -0.91
TRUB1-201ENST00000298746 K7ERU9 68 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 ORM2P19652 201 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 GNG5P63218 68 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 PNKDQ8N490 385 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 SNRNP40Q96DI7 357 aaKnown RBP9.38□□□□□ -0.91
TRUB1-201ENST00000298746 TNFRSF19Q9NS68 423 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 KLRC4-KLRK1H3BQV0 150 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 CORTO00230 105 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
TRUB1-201ENST00000298746 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 GP6Q9HCN6 339 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 ZNF835Q9Y2P0 537 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 NAV3Q8IVL0 2385 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 LOC105371242A0A075B767 164 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 C15orf61A6NNL5 157 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 PPOXP50336 477 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 FAM201AQ5SY85 155 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 KIR3DL3Q8N743 410 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 NUDT10Q8NFP7 164 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 Q8TCH9 128 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 NUDT11Q96G61 164 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 CST9LQ9H4G1 147 aa9.38□□□□□ -0.91
TRUB1-201ENST00000298746 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 A0A087X0K7 114 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 IGHV2-70DA0A0C4DH43 119 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 CD46P15529 392 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 ZNF138P52744 262 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 ZC2HC1AQ96GY0 325 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 LSM4Q9Y4Z0 139 aaKnown RBP9.37□□□□□ -0.91
TRUB1-201ENST00000298746 TRGV5A0A0B4J1U4 118 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 PROP1O75360 226 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 MMP23AO75900 390 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 SAA2-SAA4A0A096LPE2 208 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 SPRY3O43610 288 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
TRUB1-201ENST00000298746 TNFSF15O95150 251 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 SP1P08047 785 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 PRB4P10163 310 aaPredicted RBP9.37□□□□□ -0.91
TRUB1-201ENST00000298746 RIPPLY3P57055 190 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 OCIAD2Q56VL3 154 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 TMEM164Q5U3C3 297 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 CD177Q8N6Q3 437 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 CHRDL1Q9BU40 450 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
TRUB1-201ENST00000298746 SLC25A10Q9UBX3 287 aaPredicted RBP9.37□□□□□ -0.91
TRUB1-201ENST00000298746 JPT1Q9UK76 154 aa9.37□□□□□ -0.91
TRUB1-201ENST00000298746 TNRC6AQ8NDV7 1962 aaKnown RBP9.37□□□□□ -0.91
TRUB1-201ENST00000298746 IQCF6A8MYZ5 107 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms