RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 Q6ZS46 218 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 PHYHIPLQ96FC7 376 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 TMEM68Q96MH6 324 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 TNFRSF19Q9NS68 423 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 UQCC1Q9NVA1 299 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 HIVEP2P31629 2446 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 FNDC10F2Z333 226 aa19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 IGF1P05019 195 aa19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 GPX4P36969 197 aaPredicted RBP19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 CD69Q07108 199 aa19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 EXOSC2Q13868 293 aaKnown RBP19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 MLANAQ16655 118 aa19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 ARSJQ5FYB0 599 aaPredicted RBP19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 CACNG8Q8WXS5 425 aa19.37■□□□□ 0.69
GTF2A1-201ENST00000298173 CYSRT1A8MQ03 144 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 C19orf54Q5BKX5 351 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 WDR61Q9GZS3 305 aaKnown RBP19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 FNDC4Q9H6D8 234 aaPredicted RBP19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 CDC42EP3Q9UKI2 254 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 IFNA5P01569 189 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 KLK9Q2XQG4 91 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 OR1L6Q8NGR2 347 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 KLK9Q9UKQ9 250 aa19.36■□□□□ 0.69
GTF2A1-201ENST00000298173 CORTO00230 105 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 IFNA7P01567 189 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 SCGB2A2Q13296 93 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 C9orf152Q5JTZ5 239 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 SLC25A24Q6NUK1 477 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 UNQ5815/PRO19632Q6UWF5 114 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 ALKAL2Q6UX46 152 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 ZNF767PQ75MW2 155 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 HSD17B11Q8NBQ5 300 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 FANCD2OSQ96PS1 177 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 NPVFQ9HCQ7 196 aa19.35■□□□□ 0.69
GTF2A1-201ENST00000298173 G3V318 75 aa19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 TREML4Q6UXN2 200 aa19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 RBMS3Q6XE24 437 aaKnown RBP19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 SLC35E3Q7Z769 313 aa19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 FAM110DQ8TAY7 271 aaPredicted RBP19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 GSX1Q9H4S2 264 aaPredicted RBP19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 WDR83OSQ9Y284 106 aa19.34■□□□□ 0.69
GTF2A1-201ENST00000298173 UBE2L5PA0A1B0GUS4 154 aa19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 SPP1P10451 314 aa19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 DEFA4P12838 97 aa19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 ATP6V0CP27449 155 aa19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 GAMTQ14353 236 aa19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 OR5T1Q8NG75 326 aa19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 SETXQ7Z333 2677 aaKnown RBP19.33■□□□□ 0.69
GTF2A1-201ENST00000298173 IGLV11-55A0A075B6I3 123 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 SEC11BP0C7V7 166 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 SRD5A1P18405 259 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 ECSCRQ19T08 205 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 SCGB1C1Q8TD33 95 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 SCARB1Q8WTV0 552 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 TAF15Q92804 592 aaKnown RBP eCLIP19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 PLA2G2EQ9NZK7 142 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 ZNF580Q9UK33 172 aa19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 LSM4Q9Y4Z0 139 aaKnown RBP19.33■□□□□ 0.68
GTF2A1-201ENST00000298173 I3L2K1 104 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 OPRK1P41145 380 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 RUNX1Q01196 453 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 SLC16A13Q7RTY0 426 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 CENPVQ7Z7K6 275 aaPredicted RBP19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 TMED6Q8WW62 240 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 MISP3Q96FF7 219 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 SH3BGRL3Q9H299 93 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 RFNGQ9Y644 331 aa19.32■□□□□ 0.68
GTF2A1-201ENST00000298173 TRAV41A0A0B4J266 112 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 PRH1P02810 166 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 TMEM144Q7Z5S9 345 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 OR2T6Q8NHC8 308 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 GNPNAT1Q96EK6 184 aaPredicted RBP19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 DUX5Q96PT3 197 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 ESM1Q9NQ30 184 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 UBQLN2Q9UHD9 624 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 MTORP42345 2549 aa19.31■□□□□ 0.68
GTF2A1-201ENST00000298173 CLDN34H7C241 214 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 MT-CO2P00403 227 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 ETFRF1Q6IPR1 90 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 EIF5AL1Q6IS14 154 aaKnown RBP19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 SLC25A32Q9H2D1 315 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 DNAJC9-AS1A6NH13 148 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 SOX15O60248 233 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 PPIFP30405 207 aaKnown RBP19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 BTNL8Q6UX41 500 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 Q71RC1 249 aaPredicted RBP19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 MRPL36Q9P0J6 103 aaKnown RBP19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 LINC00527Q9UJ94 153 aa19.3■□□□□ 0.68
GTF2A1-201ENST00000298173 SMCO3A2RU48 225 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 K7EIM0 57 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 AP4M1O00189 453 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 MPDU1O75352 247 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 FAM157CP0CG43 387 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 FGF7P21781 194 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 PSMG3Q9BT73 122 aaPredicted RBP19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 RSG1Q9BU20 258 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 PRSS22Q9GZN4 317 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 NPFFR1Q9GZQ6 430 aa19.29■□□□□ 0.68
GTF2A1-201ENST00000298173 IGKV1OR2-108A0A075B7D4 117 aa19.28■□□□□ 0.68
GTF2A1-201ENST00000298173 TRBV9A0A0B4J1U6 114 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms