RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 PIP4P1Q86T03 277 aa12.32□□□□□ -0.44
SPIDR-201ENST00000297423 SPRY4Q9C004 299 aa12.32□□□□□ -0.44
SPIDR-201ENST00000297423 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
SPIDR-201ENST00000297423 WDFY3Q8IZQ1 3526 aa12.32□□□□□ -0.44
SPIDR-201ENST00000297423 TIMM8AO60220 97 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-201ENST00000297423 YPEL1O60688 119 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 LINC00869P0C866 280 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 CCL11P51671 97 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 Q0VG73 95 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 CENPVQ7Z7K6 275 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-201ENST00000297423 YPEL2Q96QA6 119 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 PRDM14Q9GZV8 571 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 CORTO00230 105 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 MRPL49Q13405 166 aaKnown RBP12.31□□□□□ -0.44
SPIDR-201ENST00000297423 MLANAQ16655 118 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM136Q6ZRR5 245 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 TRAV5A0A0B4J249 113 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 ZNF716A6NP11 495 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 KLRC4-KLRK1H3BQV0 150 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 PLXNB1O43157 2135 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-201ENST00000297423 ATP1A1-AS1Q5TC04 95 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 OR8A1Q8NGG7 326 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM45BQ96B21 275 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 NABP2Q9BQ15 211 aa12.31□□□□□ -0.44
SPIDR-201ENST00000297423 COL5A1P20908 1838 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-201ENST00000297423 IGHV1-69-2A0A0G2JMI3 117 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 ZNF503-AS2A6NEH8 195 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 ZNF835Q9Y2P0 537 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 KLF13Q9Y2Y9 288 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-201ENST00000297423 MPC1Q9Y5U8 109 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 TRAV30A0A087WSZ9 112 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 TCF15Q12870 199 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 RIPPLY2Q5TAB7 128 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 EBLN2Q6P2I7 272 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 DEFB127Q9H1M4 99 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 V9GYV3 84 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 H3BUT2 72 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 LYZL6O75951 148 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 IGLV2-14P01704 120 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 HOXC12P31275 282 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 LINC00173Q6ZV60 143 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
SPIDR-201ENST00000297423 OR2M7Q8NG81 312 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 C18orf32Q8TCD1 76 aa12.3□□□□□ -0.44
SPIDR-201ENST00000297423 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 CX3CL1P78423 397 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 NHLH1Q02575 133 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 F11RQ9Y624 299 aaKnown RBP12.29□□□□□ -0.44
SPIDR-201ENST00000297423 IGHV3OR15-7A0A075B7D8 119 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 LOC389332A0A1B0GUA5 103 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 PSG9Q00887 426 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 MDP1Q86V88 176 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 RBMXL3Q8N7X1 1067 aaKnown RBP12.29□□□□□ -0.44
SPIDR-201ENST00000297423 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 PROK2Q9HC23 129 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 CPAMD8Q8IZJ3 1885 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 IGHV2-70DA0A0C4DH43 119 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 SERTM2A0A1B0GWG4 89 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 HIGD1CA8MV81 97 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 SLC25A5P05141 298 aaKnown RBP12.29□□□□□ -0.44
SPIDR-201ENST00000297423 TAS2R45P59539 299 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 GNG5P63218 68 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 BPIFA4PQ86YQ2 179 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM140Q9NV12 185 aa12.29□□□□□ -0.44
SPIDR-201ENST00000297423 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
SPIDR-201ENST00000297423 CELA3BP08861 270 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 ORM2P19652 201 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 OPRK1P41145 380 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 ARR3P36575 388 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 TBC1D28Q2M2D7 210 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 OOEPA6NGQ2 149 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 OR5AL1P0C617 328 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 PYYP10082 97 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM108Q6UXF1 575 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 C12orf54Q6X4T0 127 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 SLC25A40Q8TBP6 338 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 ZNF497Q6ZNH5 498 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
SPIDR-201ENST00000297423 A0A1W2PRD5 423 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 A0A1W2PRF3 423 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 A0A1W2PRM7 423 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 C7orf71A4D174 169 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 NKX2-8O15522 239 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 COX7A2P2O60397 106 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 FXYD7P58549 80 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 RND1Q92730 232 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 FLYWCH2Q96CP2 140 aaKnown RBP12.27□□□□□ -0.44
SPIDR-201ENST00000297423 SFXN3Q9BWM7 321 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 MAP1LC3CQ9BXW4 147 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms