RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 GDF1P27539 372 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 KIR3DS1Q14943 382 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 PRSS57Q6UWY2 283 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 SIGMAR1Q99720 223 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 C1QTNF5Q9BXJ0 243 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 C12orf49Q9H741 205 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 DYSFO75923 2080 aa8.42□□□□□ -1.06
CLDN1-201ENST00000295522 TEX48A0A1B0GUV7 120 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.41□□□□□ -1.06
CLDN1-201ENST00000295522 FKBP2P26885 142 aaKnown RBP8.41□□□□□ -1.06
CLDN1-201ENST00000295522 FXYD7P58549 80 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 GNG5P63218 68 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 Q6ZSR3 168 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 OBP2BQ9NPH6 170 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 KMT2EQ8IZD2 1858 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 PLCE1Q9P212 2302 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 TMEM30CPA0ZSE6 113 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 REG1AP05451 166 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 SRSF7Q16629 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLDN1-201ENST00000295522 SPEM1Q8N4L4 309 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 Q8N7P7 452 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 SVIPQ8NHG7 77 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 DAZAP1Q96EP5 407 aaKnown RBP8.41□□□□□ -1.06
CLDN1-201ENST00000295522 C5orf30Q96GV9 206 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 LOC389332A0A1B0GUA5 103 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 FABP2P12104 132 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 GCSHP23434 173 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 LGALS7P47929 136 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 SSR4P51571 173 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 CHODLQ9H9P2 273 aa8.41□□□□□ -1.06
CLDN1-201ENST00000295522 AMMECR1Q9Y4X0 333 aaPredicted RBP8.41□□□□□ -1.06
CLDN1-201ENST00000295522 TSSC4Q9Y5U2 329 aaPredicted RBP8.41□□□□□ -1.06
CLDN1-201ENST00000295522 A0A0G2JMM0 328 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 A0A1W2PPB8 328 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 KIR3DP1A8MWS1 328 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 PSPNO60542 156 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 ADH4P08319 380 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 PYYP10082 97 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 CEACAM3P40198 252 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 RAB9AP51151 201 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 GUSBP1Q15486 140 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 ZNF497Q6ZNH5 498 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 OR10W1Q8NGF6 305 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 PRDM14Q9GZV8 571 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 C2CD4DB7Z1M9 353 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 KLK10O43240 276 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 TAS2R45P59539 299 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
CLDN1-201ENST00000295522 WFDC3Q8IUB2 231 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 FADS6Q8N9I5 356 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 HES4Q9HCC6 221 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 TCF19Q9Y242 345 aa8.4□□□□□ -1.06
CLDN1-201ENST00000295522 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 J3QT63 122 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 SPINT2O43291 252 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 AREGP15514 252 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 CCR5P51681 352 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 CKS1BP61024 79 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 TRIP6Q15654 476 aaKnown RBP8.39□□□□□ -1.07
CLDN1-201ENST00000295522 MLANAQ16655 118 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 FAM173AQ9BQD7 235 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 PI4KAP42356 2102 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 TNRC6AQ8NDV7 1962 aaKnown RBP8.39□□□□□ -1.07
CLDN1-201ENST00000295522 C22orf46C9J442 243 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 LMO7DNF2Z398 122 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 RPS19BP1Q86WX3 136 aaKnown RBP8.39□□□□□ -1.07
CLDN1-201ENST00000295522 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 S1PR3Q99500 378 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 RTL8AQ9BWD3 113 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 TMEM140Q9NV12 185 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 ROS1P08922 2347 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 K7EMI3 77 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 RFPL3SP0C7P2 107 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 HOXC12P31275 282 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 BRWD1-AS2P59051 145 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 RABAC1Q9UI14 185 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 HSPB8Q9UJY1 196 aa8.39□□□□□ -1.07
CLDN1-201ENST00000295522 PPIAL4EA0A075B759 164 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 K7EP34 96 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 GFRA3O60609 400 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 MT-CO3P00414 261 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
CLDN1-201ENST00000295522 LIPFP07098 398 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 PPIAL4FP0DN26 164 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 HBBP68871 147 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 Q6ZR03 302 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 FA2HQ7L5A8 372 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 TUSC5Q8IXB3 177 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 PTPRSQ13332 1948 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 ZNF503-AS2A6NEH8 195 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 C9orf118A6NHY6 69 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 K7EQM0 130 aa8.38□□□□□ -1.07
CLDN1-201ENST00000295522 SRFP11831 508 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms