RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 DBX1A6NMT0 343 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 FAM25AB3EWG3 89 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 FAM25CB3EWG5 89 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 FAM25GB3EWG6 89 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 F8W735 103 aaPredicted RBP10.39□□□□□ -0.75
TPM1-202ENST00000288398 I3L2K1 104 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 IFNA17P01571 189 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 FCGR2BP31994 310 aaPredicted RBP10.39□□□□□ -0.75
TPM1-202ENST00000288398 SUB1P53999 127 aaKnown RBP eCLIP10.39□□□□□ -0.75
TPM1-202ENST00000288398 UCP3P55916 312 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 MZT2AQ6P582 158 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 GBGT1Q8N5D6 347 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 ZNF114Q8NC26 417 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 RNASE11Q8TAA1 199 aaKnown RBP10.39□□□□□ -0.75
TPM1-202ENST00000288398 GATAD1Q8WUU5 269 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 SEC22AQ96IW7 307 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 NXF2Q9GZY0 626 aaKnown RBP10.39□□□□□ -0.75
TPM1-202ENST00000288398 TMEM231Q9H6L2 316 aa10.39□□□□□ -0.75
TPM1-202ENST00000288398 EPPK1P58107 5090 aaKnown RBP10.38□□□□□ -0.75
TPM1-202ENST00000288398 IGHV3OR16-13A0A075B7E8 117 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 IGHV3-74A0A0B4J1X5 117 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 HOXA1P49639 335 aaPredicted RBP10.38□□□□□ -0.75
TPM1-202ENST00000288398 RNASE10Q5GAN6 216 aaKnown RBP10.38□□□□□ -0.75
TPM1-202ENST00000288398 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 AP3S1Q92572 193 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 ZNF486Q96H40 463 aaPredicted RBP10.38□□□□□ -0.75
TPM1-202ENST00000288398 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
TPM1-202ENST00000288398 OR10C1Q96KK4 312 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 RARRES2Q99969 163 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 MFFQ9GZY8 342 aa10.38□□□□□ -0.75
TPM1-202ENST00000288398 M0QYG6 137 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 CORTO00230 105 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 IFNA4P05014 189 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 RORCP51449 518 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 TRIM16LQ309B1 348 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 SPINK9Q5DT21 86 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 RNASE12Q5GAN4 147 aaKnown RBP10.37□□□□□ -0.75
TPM1-202ENST00000288398 CCDC71LQ8N9Z2 235 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 PHLDA1Q8WV24 401 aaPredicted RBP10.37□□□□□ -0.75
TPM1-202ENST00000288398 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
TPM1-202ENST00000288398 BIRC6Q9NR09 4857 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 A0A1W2PS18 150 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 HPGDSO60760 199 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
TPM1-202ENST00000288398 PIGPP57054 158 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 VBP1P61758 197 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 NCS1P62166 190 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
TPM1-202ENST00000288398 ZNF600Q6ZNG1 722 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 CENPSQ8N2Z9 138 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 RRNAD1Q96FB5 475 aaKnown RBP10.36□□□□□ -0.75
TPM1-202ENST00000288398 COPZ2Q9P299 210 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 RABAC1Q9UI14 185 aa10.36□□□□□ -0.75
TPM1-202ENST00000288398 DFFBO76075 338 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 IGKV1-39P01597 117 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 IGKV1D-39P04432 117 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 ELK1P19419 428 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 RND3P61587 244 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 RBMS2Q15434 407 aaKnown RBP10.35□□□□□ -0.75
TPM1-202ENST00000288398 ZNF124Q15973 351 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 STHQ8IWL8 128 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 ARRDC1Q8N5I2 433 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 OR11H2Q8NH07 326 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 C11orf45Q8TAV5 145 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 ST8SIA2Q92186 375 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 FUNDC2Q9BWH2 189 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 FBXL17Q9UF56 701 aa10.35□□□□□ -0.75
TPM1-202ENST00000288398 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
TPM1-202ENST00000288398 IGHV3-66A0A0C4DH42 116 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 C3orf85A0A1B0GTC6 90 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 PI3P19957 117 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 TBPP20226 339 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 NPPCP23582 126 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 OPRK1P41145 380 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 EIF2B2P49770 351 aaKnown RBP10.34□□□□□ -0.75
TPM1-202ENST00000288398 PPP5CP53041 499 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 TMEM187Q14656 261 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 TMEM230Q96A57 120 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 METTL26Q96S19 204 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
TPM1-202ENST00000288398 TRAV2A0A0B4J234 112 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 DEFB131AP59861 70 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 IZUMO4Q1ZYL8 232 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 SCGB2B2Q4G0G5 96 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 FAM90A2PQ658T7 463 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 GRAMD2BQ96HH9 432 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
TPM1-202ENST00000288398 EXTL2Q9UBQ6 330 aa10.33□□□□□ -0.76
TPM1-202ENST00000288398 RPS10-NUDT3A0A1W2PQS6 291 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 TMEM50AO95807 157 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 IGKV1-5P01602 117 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 CD3DP04234 171 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 LEMD1Q68G75 181 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms