RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 WBP1Q96G27 269 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 ESPL1Q14674 2120 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 TSPAN13O95857 204 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 FER1L6-AS1Q8NA97 138 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 FAM131CQ96AQ9 280 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 FMC1Q96HJ9 113 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 C14orf144Q96I85 54 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 MRPL16Q9NX20 251 aaKnown RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 IGKV1D-13A0A0B4J2D9 117 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 IGLV3-19P01714 112 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 IGKV1-13P0DP09 117 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 GPX4P36969 197 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 TMEM133Q9H2Q1 129 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 TIMM23O14925 209 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 FAM19A2Q8N3H0 131 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 SOX21Q9Y651 276 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 TRAV14DV4A0A0A6YYC5 116 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 RNASE7Q9H1E1 156 aaKnown RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 EVI2AP22794 236 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 GTSCR1Q86UQ5 136 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 RPP21Q9H633 154 aaKnown RBP9.91□□□□□ -0.82
SHPRH-201ENST00000275233 MORN2Q502X0 79 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 RIPPLY3P57055 190 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 NRN1LQ496H8 165 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 OR10J3Q5JRS4 329 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 ERASQ7Z444 233 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 GTF3AQ92664 365 aaKnown RBP9.91□□□□□ -0.82
SHPRH-201ENST00000275233 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 TMEM42Q69YG0 159 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 IL36BQ9NZH7 164 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 FOXG1P55316 489 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-201ENST00000275233 FXYD7P58549 80 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 OR10W1Q8NGF6 305 aa9.91□□□□□ -0.82
SHPRH-201ENST00000275233 NYNRINQ9P2P1 1898 aaKnown RBP9.9□□□□□ -0.82
SHPRH-201ENST00000275233 PYYP10082 97 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 LEPP41159 167 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 VMO1Q7Z5L0 202 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 PSMG3Q9BT73 122 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-201ENST00000275233 PARD6GQ9BYG4 376 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-201ENST00000275233 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 APOMO95445 188 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 IGHV1-46P01743 117 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 SMIM13P0DJ93 91 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 SSBP4Q9BWG4 385 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-201ENST00000275233 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 ZNF98A6NK75 572 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 UPK2O00526 184 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 MLNRO43193 412 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 NAT1P18440 290 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 PRR31Q5SQ13 230 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 IGHV3-73A0A0B4J1V6 119 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 A0A1B0GTI1 187 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 A0A1B0GUT8 65 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 SAP30O75446 220 aa9.9□□□□□ -0.82
SHPRH-201ENST00000275233 TRBV9A0A0B4J1U6 114 aa9.9□□□□□ -0.83
SHPRH-201ENST00000275233 SELLP14151 372 aa9.9□□□□□ -0.83
SHPRH-201ENST00000275233 TMEM50AO95807 157 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 BRD3OSQ6XYD6 125 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 XIRP1Q702N8 1843 aaKnown RBP9.89□□□□□ -0.83
SHPRH-201ENST00000275233 TRAV12-3A0A0B4J271 114 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 CNTFRP26992 372 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 NHLRC3Q5JS37 347 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 TCF23Q7RTU1 214 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 DPRXA6NFQ7 191 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 CA7P43166 264 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 CFHR1Q03591 330 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 SRSF7Q16629 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
SHPRH-201ENST00000275233 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 ZNF497Q6ZNH5 498 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 HIGD1CA8MV81 97 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 HOXA5P20719 270 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 MRPS18CQ9Y3D5 142 aaKnown RBP9.89□□□□□ -0.83
SHPRH-201ENST00000275233 CSRP1P21291 193 aaKnown RBP9.89□□□□□ -0.83
SHPRH-201ENST00000275233 ZFP36L1Q07352 338 aaKnown RBP9.89□□□□□ -0.83
SHPRH-201ENST00000275233 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
SHPRH-201ENST00000275233 A0A0U1RRA0 63 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 OR9G9P0C7N8 305 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 RPL35AP18077 110 aaKnown RBP9.88□□□□□ -0.83
SHPRH-201ENST00000275233 UCP1P25874 307 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 CTAG1AP78358 180 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 UBE2DNLQ8IWF7 75 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 LRTM2Q8N967 370 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 H3BRM9 83 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 PAX1P15863 534 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 PSMG4Q5JS54 123 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 E9PLN8 166 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 TMEM250H0YL14 139 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 TBX6O95947 436 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-201ENST00000275233 ZNF672Q499Z4 452 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-201ENST00000275233 VKORC1Q9BQB6 163 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 RNF125Q96EQ8 232 aa9.88□□□□□ -0.83
SHPRH-201ENST00000275233 DOCK4Q8N1I0 1966 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms