RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CARHSP1Q9Y2V2 147 aaKnown RBP9.63□□□□□ -0.87
SDE2-201ENST00000272091 CR1P17927 2039 aa9.63□□□□□ -0.87
SDE2-201ENST00000272091 SPG11Q96JI7 2443 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 BTBD17A6NE02 478 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
SDE2-201ENST00000272091 PRR20EP86478 221 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 PRR20CP86479 221 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 PRR20DP86480 221 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 PRR20BP86481 221 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 PRR20AP86496 221 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 NDPQ00604 133 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 ICAM4Q14773 271 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 AVPP01185 164 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 APOC3P02656 99 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 IGHV4-38-2P0DP08 117 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 CENPEQ02224 2701 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 SEC14L6B5MCN3 397 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 IGHV3-48P01763 117 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 GPX4P36969 197 aaPredicted RBP9.62□□□□□ -0.87
SDE2-201ENST00000272091 FAM122CQ6P4D5 195 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
SDE2-201ENST00000272091 SLC45A2Q9UMX9 530 aa9.62□□□□□ -0.87
SDE2-201ENST00000272091 ANKRD17O75179 2603 aaKnown RBP9.61□□□□□ -0.87
SDE2-201ENST00000272091 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 J3QKU1 62 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 SLC25A16P16260 332 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 PLGLAQ15195 96 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 HAGHQ16775 308 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 ASPHD1Q5U4P2 390 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 STPG3Q8N7X2 389 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
SDE2-201ENST00000272091 TMPRSS5Q9H3S3 457 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 IGKV1D-37A0A075B6S9 117 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 TRAV40A0A0B4J280 105 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 CRYGCP07315 174 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 BRD3OSQ6XYD6 125 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 RAB24Q969Q5 203 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
SDE2-201ENST00000272091 SEC11CQ9BY50 192 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 CTXND1A0A1B0GTU2 59 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 ACTL6BO94805 426 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 HBE1P02100 147 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 MBP02144 154 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 TMEM11P17152 192 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 Q8N9W7 124 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 CACNG8Q8WXS5 425 aa9.61□□□□□ -0.87
SDE2-201ENST00000272091 F11RQ9Y624 299 aaKnown RBP9.61□□□□□ -0.87
SDE2-201ENST00000272091 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 F8W036 122 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 FBP1P09467 338 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
SDE2-201ENST00000272091 GATA2P23769 480 aaPredicted RBP9.6□□□□□ -0.87
SDE2-201ENST00000272091 PPT1P50897 306 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 ACOT6Q3I5F7 207 aaPredicted RBP9.6□□□□□ -0.87
SDE2-201ENST00000272091 KLF17Q5JT82 389 aaPredicted RBP9.6□□□□□ -0.87
SDE2-201ENST00000272091 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 PIFOQ8TCI5 191 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 FAM74A7A6NL05 159 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 EGR2P11161 476 aaPredicted RBP9.6□□□□□ -0.87
SDE2-201ENST00000272091 BTN1A1Q13410 526 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 PEA15Q15121 130 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 FAM74A3Q4VXF1 159 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 OR1P1Q8NH06 330 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 SLC39A9Q9NUM3 307 aa9.6□□□□□ -0.87
SDE2-201ENST00000272091 POLQO75417 2590 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 OR10J1P30954 320 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 B2MP61769 119 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 FXYD3Q14802 87 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 BEX4Q9NWD9 120 aaPredicted RBP9.59□□□□□ -0.87
SDE2-201ENST00000272091 HIF1ANQ9NWT6 349 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 APCP25054 2843 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 A0A0U1RQK1 487 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 B4DSR2 109 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 SUB1P53999 127 aaKnown RBP eCLIP9.59□□□□□ -0.87
SDE2-201ENST00000272091 CX3CL1P78423 397 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 ACY3Q96HD9 319 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 PBDC1Q9BVG4 233 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 ACTR3CQ9C0K3 210 aaPredicted RBP9.59□□□□□ -0.87
SDE2-201ENST00000272091 GNG13Q9P2W3 67 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 SRP19P09132 144 aaKnown RBP9.59□□□□□ -0.87
SDE2-201ENST00000272091 CDC34P49427 236 aaPredicted RBP9.59□□□□□ -0.87
SDE2-201ENST00000272091 DEFA5Q01523 94 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 THAP8Q8NA92 274 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
SDE2-201ENST00000272091 SLC25A33Q9BSK2 321 aa9.59□□□□□ -0.87
SDE2-201ENST00000272091 ZNF469Q96JG9 3925 aaPredicted RBP9.59□□□□□ -0.87
SDE2-201ENST00000272091 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms