RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 MISP3Q96FF7 219 aa6.4□□□□□ -1.38
ERCC8-201ENST00000265038 C7orf50Q9BRJ6 194 aaKnown RBP6.4□□□□□ -1.38
ERCC8-201ENST00000265038 C21orf62Q9NYP8 219 aa6.4□□□□□ -1.38
ERCC8-201ENST00000265038 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
ERCC8-201ENST00000265038 LSM4Q9Y4Z0 139 aaKnown RBP6.4□□□□□ -1.38
ERCC8-201ENST00000265038 DNAH3Q8TD57 4116 aa6.4□□□□□ -1.38
ERCC8-201ENST00000265038 NOTCH1P46531 2555 aa6.4□□□□□ -1.38
ERCC8-201ENST00000265038 OR2T8A6NH00 312 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 TGOLN2O43493 480 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 MT-CO2P00403 227 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 SULT1A3P0DMM9 295 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 SULT1A4P0DMN0 295 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 VAMP1P23763 118 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 SRPXP78539 464 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 BSXQ3C1V8 233 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 C11orf87Q6NUJ2 197 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 PLET1Q6UQ28 207 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 UNQ9165/PRO28630Q6UXU0 137 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 LRTM2Q8N967 370 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 ZNF414Q96IQ9 312 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 ATP6V0BQ99437 205 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 CHRDL1Q9BU40 450 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 CCDC32Q9BV29 185 aa6.4□□□□□ -1.39
ERCC8-201ENST00000265038 IGHV3-35A0A0C4DH35 117 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 C2orf70A6NJV1 201 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 CENPXA8MT69 81 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 NXPH3O95157 252 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 LY86O95711 162 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 IGHV3-48P01763 117 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 GP9P14770 177 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 ADMP35318 185 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 SNCAP37840 140 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 FAM106AQ4KMX7 169 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 PINX1Q96BK5 328 aaKnown RBP6.39□□□□□ -1.39
ERCC8-201ENST00000265038 BSCL2Q96G97 398 aaPredicted RBP6.39□□□□□ -1.39
ERCC8-201ENST00000265038 ZNF436Q9C0F3 470 aaPredicted RBP6.39□□□□□ -1.39
ERCC8-201ENST00000265038 ENY2Q9NPA8 101 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 BATF3Q9NR55 127 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 PTTG2Q9NZH5 202 aa6.39□□□□□ -1.39
ERCC8-201ENST00000265038 PRKDCP78527 4128 aaKnown RBP6.39□□□□□ -1.39
ERCC8-201ENST00000265038 A0A1B0GU03 582 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 DUXBA0A1W2PPF3 345 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 ZNF320A2RRD8 509 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 TMEM213A2RRL7 107 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 C9orf170A2RU37 121 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 IZUMO1RA6ND01 250 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 LYRM1O43325 122 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 PITX3O75364 302 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 CTSGP08311 255 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 FOLR2P14207 255 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 ANXA7P20073 488 aaKnown RBP6.38□□□□□ -1.39
ERCC8-201ENST00000265038 FCGR2BP31994 310 aaPredicted RBP6.38□□□□□ -1.39
ERCC8-201ENST00000265038 MFAP4P55083 255 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 SMCO1Q147U7 214 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 MLANAQ16655 118 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 Q56UQ5 140 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 TMEM170AQ8WVE7 144 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 S100ZQ8WXG8 99 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 FNDC4Q9H6D8 234 aaPredicted RBP6.38□□□□□ -1.39
ERCC8-201ENST00000265038 CEBPZOSA8MTT3 80 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 A8MWP6 167 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 OR4E1P0C645 316 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 CBLN1P23435 193 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 SUB1P53999 127 aaKnown RBP eCLIP6.38□□□□□ -1.39
ERCC8-201ENST00000265038 UBE2MP61081 183 aaKnown RBP6.38□□□□□ -1.39
ERCC8-201ENST00000265038 TNFRSF9Q07011 255 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 DEFB114Q30KQ6 69 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 TM4SF20Q53R12 229 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 SPSB3Q6PJ21 355 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 CACNG8Q8WXS5 425 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 TXN2Q99757 166 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 MRPL36Q9P0J6 103 aaKnown RBP6.38□□□□□ -1.39
ERCC8-201ENST00000265038 HSPB7Q9UBY9 170 aa6.38□□□□□ -1.39
ERCC8-201ENST00000265038 C8orf88P0DMB2 117 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 SLC25A6P12236 298 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 HTR2BP41595 481 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 CD300EQ496F6 205 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-201ENST00000265038 C2orf83Q53S99 150 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 GGNBP1Q5YKI7 109 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 RBKSQ9H477 322 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 HEYLQ9NQ87 328 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-201ENST00000265038 CACFD1Q9UGQ2 172 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 TBC1D24Q9ULP9 559 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 TMED3Q9Y3Q3 217 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 PIGBOS1A0A0B4J2F0 54 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 ZNF785A8K8V0 405 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 CORTO00230 105 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 NDUFA4O00483 81 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 TCRBP04435 133 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 HOXB5P09067 269 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 IFITM3Q01628 133 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 DHRS2Q13268 280 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 LYG2Q86SG7 212 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 Q8N1Y9 231 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 UXS1Q8NBZ7 420 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 DUSP18Q8NEJ0 188 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 SLC24A4Q8NFF2 622 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 OR2K2Q8NGT1 345 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms