RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FOXA2Q9Y261 457 aaPredicted RBP14.34□□□□□ -0.11
SDF4-201ENST00000263741 KCNIP3Q9Y2W7 256 aa14.34□□□□□ -0.11
SDF4-201ENST00000263741 TEX22C9J3V5 150 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 F8W036 122 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 PF4V1P10720 104 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 BLOC1S1P78537 153 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 SLC35G3Q8N808 338 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 TREM1Q9NP99 234 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 GSKIPQ9P0R6 139 aa14.33□□□□□ -0.12
SDF4-201ENST00000263741 CARHSP1Q9Y2V2 147 aaKnown RBP14.33□□□□□ -0.12
SDF4-201ENST00000263741 TCRBV4S1A1TA0A5B7 111 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 FAM74A7A6NL05 159 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 SNAPINO95295 136 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 IGHG4P01861 327 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 HOXB5P09067 269 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 P0C879 139 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 FAM74A3Q4VXF1 159 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 TEX38Q6PEX7 206 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 OR10C1Q96KK4 312 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 MS4A10Q96PG2 267 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 HINT2Q9BX68 163 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 COMMD5Q9GZQ3 224 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 PKD1L1Q8TDX9 2849 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 C15orf61A6NNL5 157 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 ADARB2-AS1A8MUL3 147 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 REG1AP05451 166 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 AREGP15514 252 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 IAH1Q2TAA2 248 aaPredicted RBP14.32□□□□□ -0.12
SDF4-201ENST00000263741 AKIRIN2Q53H80 203 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 OR10W1Q8NGF6 305 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 TMEM56Q96MV1 263 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 TMEM56-RWDD3S4R434 201 aa14.32□□□□□ -0.12
SDF4-201ENST00000263741 IGLV1-40P01703 118 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 PRH1P02810 166 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 PSMB8P28062 276 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 MAS1LP35410 378 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 TMEM267Q0VDI3 215 aaPredicted RBP14.31□□□□□ -0.12
SDF4-201ENST00000263741 SPINK9Q5DT21 86 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 LYZL2Q7Z4W2 148 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 QTRT1Q9BXR0 403 aaKnown RBP14.31□□□□□ -0.12
SDF4-201ENST00000263741 OR51B2Q9Y5P1 312 aa14.31□□□□□ -0.12
SDF4-201ENST00000263741 TEX50A0A1B0GTY4 177 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 K7EPK0 472 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 RBMXL2O75526 392 aaKnown RBP14.3□□□□□ -0.12
SDF4-201ENST00000263741 C10orf91Q5T1B1 145 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 Q6ZRM9 215 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 OR4A16Q8NH70 328 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 SPIN2AQ99865 258 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 SPIN2BQ9BPZ2 258 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 SEC11CQ9BY50 192 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 ZNF355PQ9NSJ1 428 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 IL15RAQ13261 267 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 FOXE3Q13461 319 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 CXorf66Q5JRM2 361 aaPredicted RBP14.3□□□□□ -0.12
SDF4-201ENST00000263741 ZFP57Q9NU63 452 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 TMEM14BQ9NUH8 114 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 COA4Q9NYJ1 87 aa14.3□□□□□ -0.12
SDF4-201ENST00000263741 NXPH3O95157 252 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 TSPAN15O95858 294 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 GPR146Q96CH1 333 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 SMIM8Q96KF7 97 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 PRNDQ9UKY0 176 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 JTBO76095 146 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 PVALBP20472 110 aaPredicted RBP14.29□□□□□ -0.12
SDF4-201ENST00000263741 LGI3Q8N145 548 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 CACNG5Q9UF02 275 aa14.29□□□□□ -0.12
SDF4-201ENST00000263741 IGLC7A0M8Q6 106 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 MED6O75586 246 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 DEDDO75618 318 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 ELANEP08246 267 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 RPL12P30050 165 aaKnown RBP14.28□□□□□ -0.12
SDF4-201ENST00000263741 CAV2P51636 162 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 RPL23AP62750 156 aaKnown RBP14.28□□□□□ -0.12
SDF4-201ENST00000263741 AKR1C1Q04828 323 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 COMMD1Q8N668 190 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 FAM110DQ8TAY7 271 aaPredicted RBP14.28□□□□□ -0.12
SDF4-201ENST00000263741 OR5B12Q96R08 314 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 UQCC1Q9NVA1 299 aa14.28□□□□□ -0.12
SDF4-201ENST00000263741 TSSC4Q9Y5U2 329 aaPredicted RBP14.28□□□□□ -0.12
SDF4-201ENST00000263741 ST8SIA3O43173 380 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 ADCYAP1P18509 176 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 SULT1A2P50226 295 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 TPPP2P59282 170 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 KLHL30-AS1Q8NEE0 82 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 OR1L8Q8NGR8 309 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 IL22RA2Q969J5 263 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 HRH4Q9H3N8 390 aa14.27□□□□□ -0.12
SDF4-201ENST00000263741 TRGV3P03979 118 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 RAB9AP51151 201 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 SRPXP78539 464 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 WT1-ASQ06250 92 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 GUCA2BQ16661 112 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 DEFB136Q30KP8 78 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 RPL7L1Q6DKI1 246 aaKnown RBP14.27□□□□□ -0.13
SDF4-201ENST00000263741 NDUFA11Q86Y39 141 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 RNF152Q8N8N0 203 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 GNB4Q9HAV0 340 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 NDUFA4L2Q9NRX3 87 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 MLXQ9UH92 298 aa14.27□□□□□ -0.13
SDF4-201ENST00000263741 H2AFB1P0C5Y9 115 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms