RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SAP25Q8TEE9 199 aa10.11□□□□□ -0.79
SMG6-201ENST00000263073 FGF16O43320 207 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 TRGV3P03979 118 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 CECR9P0C854 216 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 RNF144BQ7Z419 303 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 EEF1AKMT3Q96AZ1 226 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 PTPRZ1P23471 2315 aaPredicted RBP10.1□□□□□ -0.79
SMG6-201ENST00000263073 SAA2-SAA4A0A096LPE2 208 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 IGHV3-11P01762 117 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 SAA2P0DJI9 122 aaPredicted RBP10.1□□□□□ -0.79
SMG6-201ENST00000263073 CKS1BP61024 79 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 RIPPLY2Q5TAB7 128 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 LINC00114Q6XXX2 140 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 SFXN3Q9BWM7 321 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 C1orf53Q5VUE5 145 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 COQ2Q96H96 371 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
SMG6-201ENST00000263073 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 TSPAN7P41732 249 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 ASIPP42127 132 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 ORMDL3Q8N138 153 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 TUBA4BQ9H853 241 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 AHRRA9YTQ3 701 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 CTSSP25774 331 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 PSG7Q13046 419 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 LCN12Q6JVE5 192 aa10.1□□□□□ -0.79
SMG6-201ENST00000263073 FAM106AQ4KMX7 169 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 C1orf122Q6ZSJ8 110 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 TRAV9-2A0A087WT02 112 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 FTH1P19P0C7X4 201 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 TIMP3P35625 211 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 NEUROG1Q92886 237 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 TRAV2A0A0B4J234 112 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 TSPOP30536 169 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 CLEC2AQ6UVW9 174 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 OR10W1Q8NGF6 305 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 GTF3AQ92664 365 aaKnown RBP10.09□□□□□ -0.79
SMG6-201ENST00000263073 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 ANAPC13Q9BS18 74 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 J3QRE1 110 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 CHD5Q8TDI0 1954 aa10.09□□□□□ -0.79
SMG6-201ENST00000263073 FGFBP3Q8TAT2 258 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 C5orf30Q96GV9 206 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 TNFRSF18Q9Y5U5 241 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.08□□□□□ -0.8
SMG6-201ENST00000263073 SRD5A1P18405 259 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 GDF15Q99988 308 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 ZNF236Q9UL36 1845 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 SVILO95425 2214 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 FDCSPQ8NFU4 85 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 NCR2O95944 276 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 PDLIM4P50479 330 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 ZNF585BQ52M93 769 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 PYY3Q5JQD4 70 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 HEATR5BQ9P2D3 2071 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 COX5BP10606 129 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 ZNF581Q9P0T4 197 aa10.08□□□□□ -0.8
SMG6-201ENST00000263073 A0A087X0K7 114 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 CD5P06127 495 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 PPP1R32Q7Z5V6 425 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
SMG6-201ENST00000263073 ZNF257Q9Y2Q1 563 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 MTCL1Q9Y4B5 1905 aaKnown RBP10.07□□□□□ -0.8
SMG6-201ENST00000263073 LYPD3O95274 346 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 SP7Q8TDD2 431 aaPredicted RBP10.07□□□□□ -0.8
SMG6-201ENST00000263073 NPFFR1Q9GZQ6 430 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 GAS1P54826 345 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 EFNB3Q15768 340 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 IGHV1-2P23083 117 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 C1QTNF5Q9BXJ0 243 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 ZNF703Q9H7S9 590 aaPredicted RBP10.07□□□□□ -0.8
SMG6-201ENST00000263073 KBTBD11-OT1A0A1B0GTJ5 212 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 ATP5LO75964 103 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 NUTF2P61970 127 aaKnown RBP10.07□□□□□ -0.8
SMG6-201ENST00000263073 DNM1P46Q6ZS02 220 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 MTURNQ8N3F0 131 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
SMG6-201ENST00000263073 TRBV6-7A0A0A0MS04 114 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 UMODP07911 640 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 CENPVQ7Z7K6 275 aaPredicted RBP10.06□□□□□ -0.8
SMG6-201ENST00000263073 DUX3Q96PT4 197 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 C5orf63A6NC05 138 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 LINC00205P59089 165 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
SMG6-201ENST00000263073 TEX38Q6PEX7 206 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 PILRBQ9UKJ0 227 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 SIGMAR1Q99720 223 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 KLHDC3Q9BQ90 382 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 RNF115Q9Y4L5 304 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms