RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TMEM14BQ9NUH8 114 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 CHEK1O14757 476 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 TNFAIP8O95379 198 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 APOA1P02647 267 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 CTSGP08311 255 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 ADMP35318 185 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 HOXA1P49639 335 aaPredicted RBP9.08□□□□□ -0.96
TRAF4-202ENST00000262396 HSPE1P61604 102 aaKnown RBP9.08□□□□□ -0.96
TRAF4-202ENST00000262396 PRCDQ00LT1 54 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 SPINK9Q5DT21 86 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 RNASE10Q5GAN6 216 aaKnown RBP9.08□□□□□ -0.96
TRAF4-202ENST00000262396 TCF24Q7RTU0 167 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 CADM3Q8N126 398 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
TRAF4-202ENST00000262396 RARRES2Q99969 163 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 FAM212BQ9NTI7 297 aaPredicted RBP9.08□□□□□ -0.96
TRAF4-202ENST00000262396 FBXL17Q9UF56 701 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 ANAPC10Q9UM13 185 aa9.08□□□□□ -0.96
TRAF4-202ENST00000262396 M0QYG6 137 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 RORCP51449 518 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 LYSMD2Q8IV50 215 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 CCDC71LQ8N9Z2 235 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 GPX8Q8TED1 209 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 AP3S1Q92572 193 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 YIPF6Q96EC8 236 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 NXF2Q9GZY0 626 aaKnown RBP9.07□□□□□ -0.96
TRAF4-202ENST00000262396 MFFQ9GZY8 342 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 COPZ2Q9P299 210 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 RABAC1Q9UI14 185 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
TRAF4-202ENST00000262396 IGHV3-66A0A0C4DH42 116 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 A0A1W2PS18 150 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 DBX1A6NMT0 343 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 I3L2K1 104 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 CORTO00230 105 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 HPGDSO60760 199 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 CA1P00915 261 aaPredicted RBP9.06□□□□□ -0.96
TRAF4-202ENST00000262396 FCGR2BP31994 310 aaPredicted RBP9.06□□□□□ -0.96
TRAF4-202ENST00000262396 UCP3P55916 312 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 VBP1P61758 197 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 NCS1P62166 190 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 SCGB2B2Q4G0G5 96 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 ZNF600Q6ZNG1 722 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 STHQ8IWL8 128 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 C11orf45Q8TAV5 145 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 GATAD1Q8WUU5 269 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 PHLDA1Q8WV24 401 aaPredicted RBP9.06□□□□□ -0.96
TRAF4-202ENST00000262396 TMEM230Q96A57 120 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 SEC22AQ96IW7 307 aa9.06□□□□□ -0.96
TRAF4-202ENST00000262396 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
TRAF4-202ENST00000262396 PI3P19957 117 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 NPPCP23582 126 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 OPRK1P41145 380 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 PPP5CP53041 499 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 PIGPP57054 158 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 TMEM187Q14656 261 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 RBMS2Q15434 407 aaKnown RBP9.05□□□□□ -0.96
TRAF4-202ENST00000262396 ZNF124Q15973 351 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 TOMM20LQ6UXN7 152 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 OR11H2Q8NH07 326 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 ZFAND1Q8TCF1 268 aa9.05□□□□□ -0.96
TRAF4-202ENST00000262396 ZNF486Q96H40 463 aaPredicted RBP9.05□□□□□ -0.96
TRAF4-202ENST00000262396 PUS1Q9Y606 427 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAF4-202ENST00000262396 C3orf85A0A1B0GTC6 90 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-202ENST00000262396 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-202ENST00000262396 ELK1P19419 428 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 EIF2B2P49770 351 aaKnown RBP9.04□□□□□ -0.96
TRAF4-202ENST00000262396 DEFB131AP59861 70 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 EWSR1Q01844 656 aaKnown RBP eCLIP9.04□□□□□ -0.962e-6■■■■□ 23.3
TRAF4-202ENST00000262396 IZUMO4Q1ZYL8 232 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 ZNF114Q8NC26 417 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 C15orf40Q8WUR7 153 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 ST8SIA2Q92186 375 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 GRAMD2BQ96HH9 432 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 OR10C1Q96KK4 312 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 METTL26Q96S19 204 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 FUNDC2Q9BWH2 189 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 BIRC6Q9NR09 4857 aa9.04□□□□□ -0.96
TRAF4-202ENST00000262396 RPS10-NUDT3A0A1W2PQS6 291 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 DFFBO76075 338 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 ETV6P41212 452 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 LEMD1Q68G75 181 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 ARRDC1Q8N5I2 433 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 MS4A6AQ9H2W1 248 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 EXTL2Q9UBQ6 330 aa9.03□□□□□ -0.96
TRAF4-202ENST00000262396 C14orf166Q9Y224 244 aaKnown RBP9.03□□□□□ -0.96
TRAF4-202ENST00000262396 HYDINQ4G0P3 5121 aa9.02□□□□□ -0.96
TRAF4-202ENST00000262396 TEX13DA0A0J9YY54 714 aaPredicted RBP9.02□□□□□ -0.97
TRAF4-202ENST00000262396 RGS5O15539 181 aa9.02□□□□□ -0.97
TRAF4-202ENST00000262396 IGKV1-39P01597 117 aa9.02□□□□□ -0.97
TRAF4-202ENST00000262396 CD3DP04234 171 aa9.02□□□□□ -0.97
TRAF4-202ENST00000262396 IGKV1D-39P04432 117 aa9.02□□□□□ -0.97
TRAF4-202ENST00000262396 TBPP20226 339 aa9.02□□□□□ -0.97
TRAF4-202ENST00000262396 NANOS2P60321 138 aaKnown RBP9.02□□□□□ -0.97
TRAF4-202ENST00000262396 RND3P61587 244 aa9.02□□□□□ -0.97
TRAF4-202ENST00000262396 SP6Q3SY56 376 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms