RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NBEAP1P0C6P0 100 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 LYL1P12980 280 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 ZP1P60852 638 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 MORN2Q502X0 79 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 OR10J3Q5JRS4 329 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 WDR82Q6UXN9 313 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 RPUSD1Q9UJJ7 312 aaKnown RBP3.62□□□□□ -1.83
VPS13C-202ENST00000261517 CDX1P47902 265 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-202ENST00000261517 ORMDL2Q53FV1 153 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 SLC25A48Q6ZT89 311 aaKnown RBP3.62□□□□□ -1.83
VPS13C-202ENST00000261517 RPP21Q9H633 154 aaKnown RBP3.62□□□□□ -1.83
VPS13C-202ENST00000261517 A0A1W2PR80 420 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 NAPSAO96009 420 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 UNC119Q13432 240 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 REC114Q7Z4M0 266 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 IL17BQ9UHF5 180 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 DIRC3C9JPN6 131 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 M0R3E3 92 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 GPX1P07203 203 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 RHOGP84095 191 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 PSG7Q13046 419 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 EFNB3Q15768 340 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 C8orf46Q8TAG6 207 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 FAM103A1Q9BTL3 118 aaKnown RBP3.62□□□□□ -1.83
VPS13C-202ENST00000261517 GNB1LQ9BYB4 327 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 GFRA4Q9GZZ7 299 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 C9orf172C9J069 976 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 CD55P08174 381 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 NUDT10Q8NFP7 164 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 CHD7Q9P2D1 2997 aa3.62□□□□□ -1.83
VPS13C-202ENST00000261517 TRAV34A0A0B4J273 112 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 FABP2P12104 132 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 VDAC2P45880 294 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 HINT1P49773 126 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NCOA6Q14686 2063 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LEPROTL1O95214 131 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 HIST1H1AQ02539 215 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TBR1Q16650 682 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 GGNQ86UU5 652 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LINC00311Q8N616 119 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 RCC1LQ96I51 464 aaKnown RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 RNF114Q9Y508 228 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NPFFO15130 113 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 C1QCP02747 245 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 IER3P46695 156 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 ID3Q02535 119 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF324BQ6AW86 544 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 CENPVQ7Z7K6 275 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 SMOC1Q9H4F8 434 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 IL36RNQ9UBH0 155 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TNRC6AQ8NDV7 1962 aaKnown RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TRAV21A0A0B4J279 112 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 PF4P02776 101 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 CEBPDP49716 269 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 FGF8P55075 233 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 PRSS53Q2L4Q9 553 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 CT83Q5H943 113 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF474Q6S9Z5 364 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LHFPL1Q86WI0 220 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 DUX5Q96PT3 197 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 SLX1AQ9BQ83 275 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TECTAO75443 2155 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 MED12Q93074 2177 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 IGKV3-15P01624 115 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 HAPLN4Q86UW8 402 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 PNKDQ8N490 385 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 RRHO14718 337 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 CAMPP49913 170 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LINC00052Q96N35 136 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 MCRIP2Q9BUT9 160 aaKnown RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 PLSCR3Q9NRY6 295 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 MED13LQ71F56 2210 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TRIOO75962 3097 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LGALS3P17931 250 aaKnown RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM105Q8N8V8 129 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 IFITM10A6NMD0 228 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 FABP5P3A8MUU1 101 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 H0Y8G0 127 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NDUFB4O95168 129 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 OR9G9P0C7N8 305 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NBL1P41271 181 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 OTPQ5XKR4 325 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 SFTA2Q6UW10 78 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 ORMDL3Q8N138 153 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 SLC25A15Q9Y619 301 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 PGPA6NDG6 321 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 OR2J3O76001 311 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NUDT3O95989 172 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TRGV3P03979 118 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TRGC2P03986 189 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 THY1P04216 161 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 SLC25A34Q6PIV7 304 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LINC00305Q7Z4B0 112 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 OR11H4Q8NGC9 324 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 RTBDNQ9BSG5 229 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LMO1P25800 156 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 PSMB2P49721 201 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 ERVK11-1P61568 191 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TGIF1Q15583 401 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms