RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FCN1O00602 326 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 NBR2O15453 112 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 TSPAN15O95858 294 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 MDKP21741 143 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-201ENST00000258962 MAS1LP35410 378 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 CHRNA7P36544 502 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 COMPP49747 757 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-201ENST00000258962 SERF2P84101 59 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 WT1-ASQ06250 92 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 TNXAQ16473 311 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 BTNL8Q6UX41 500 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 CCDC28AQ8IWP9 274 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 LFNGQ8NES3 379 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 TAF15Q92804 592 aaKnown RBP eCLIP13.88□□□□□ -0.19
SRSF1-201ENST00000258962 MDFIQ99750 246 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 HRH4Q9H3N8 390 aa13.88□□□□□ -0.19
SRSF1-201ENST00000258962 BTBD17A6NE02 478 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 SOX15O60248 233 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 IFNA4P05014 189 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 RPL27AP46776 148 aaKnown RBP13.87□□□□□ -0.19
SRSF1-201ENST00000258962 DLK1P80370 383 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 HES1Q14469 280 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 TUSC1Q2TAM9 212 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 C2orf83Q53S99 150 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 LYPD6BQ8NI32 183 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 GGACTQ9BVM4 153 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 TIMM9Q9Y5J7 89 aa13.87□□□□□ -0.19
SRSF1-201ENST00000258962 IGLC7A0M8Q6 106 aa13.86□□□□□ -0.19
SRSF1-201ENST00000258962 FHITP49789 147 aa13.86□□□□□ -0.19
SRSF1-201ENST00000258962 ACTL6BO94805 426 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 HBE1P02100 147 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 FGF7P21781 194 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 GNB1P62873 340 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 ERHP84090 104 aaKnown RBP13.85□□□□□ -0.19
SRSF1-201ENST00000258962 ZNF616Q08AN1 781 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 PLGLAQ15195 96 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 WDR83OSQ9Y284 106 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 FAM96BQ9Y3D0 163 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 FBXO7Q9Y3I1 522 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 SOX21Q9Y651 276 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-201ENST00000258962 COL6A5A8TX70 2615 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 TEX22C9J3V5 150 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 SNCAP37840 140 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 C5orf64Q2M2E5 130 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 DEFB112Q30KQ8 113 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 KRTAP24-1Q3LI83 254 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 ARSJQ5FYB0 599 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-201ENST00000258962 CENPVQ7Z7K6 275 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-201ENST00000258962 FAM213BQ8TBF2 198 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 ZNF48Q96MX3 618 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-201ENST00000258962 PBDC1Q9BVG4 233 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 KIAA1456Q9P272 454 aa13.85□□□□□ -0.19
SRSF1-201ENST00000258962 C17orf112F2Z3M2 114 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 MBP02144 154 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 AREGP15514 252 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 TMEM11P17152 192 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 BRS3P32247 399 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 MRPL41Q8IXM3 137 aaKnown RBP13.84□□□□□ -0.19
SRSF1-201ENST00000258962 ZNF709Q8N972 641 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 SRSF12Q8WXF0 261 aaKnown RBP13.84□□□□□ -0.19
SRSF1-201ENST00000258962 NARS2Q96I59 477 aaKnown RBP13.84□□□□□ -0.19
SRSF1-201ENST00000258962 P2RX4Q99571 388 aa13.84□□□□□ -0.19
SRSF1-201ENST00000258962 A0A0U1RQK1 487 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 MPDU1O75352 247 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 REG1AP05451 166 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 FAM106CPP0CH98 169 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 PEA15Q15121 130 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 TREML4Q6UXN2 200 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 C19orf24Q9BVV8 132 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 NPCDR1Q9BY65 106 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 TREM1Q9NP99 234 aa13.83□□□□□ -0.2
SRSF1-201ENST00000258962 MDFIC2A0A1B0GVS7 189 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 SMCO3A2RU48 225 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 H2AFB1P0C5Y9 115 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 BPIFCQ8NFQ6 507 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 SMDT1Q9H4I9 107 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 ESM1Q9NQ30 184 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 CUBNO60494 3623 aa13.82□□□□□ -0.2
SRSF1-201ENST00000258962 TMEM218A2RU14 115 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 DNAJC9-AS1A6NH13 148 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 FNDC10F2Z333 226 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 APELAP0DMC3 54 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 PVRIGQ6DKI7 326 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 ACSM6Q6P461 480 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 Q8N9W7 124 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 ZNF114Q8NC26 417 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 LINC00052Q96N35 136 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 DUX5Q96PT3 197 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 PRDM13Q9H4Q3 707 aa13.81□□□□□ -0.2
SRSF1-201ENST00000258962 LSM4Q9Y4Z0 139 aaKnown RBP13.81□□□□□ -0.2
SRSF1-201ENST00000258962 FBN1P35555 2871 aaKnown RBP13.8□□□□□ -0.2
SRSF1-201ENST00000258962 NCBP2LA6PVI3 153 aaKnown RBP13.8□□□□□ -0.2
SRSF1-201ENST00000258962 FBP1P09467 338 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 MFAP2P55001 183 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 CD69Q07108 199 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 MLANAQ16655 118 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 Q6YL49 198 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 C19orf35Q6ZS72 473 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms