RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 A0A1W2PPZ6 126 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 C3orf80F5H4A9 247 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 HAND1O96004 215 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 ERVK-16P61578 105 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 GDF5OSQ5U4N7 250 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 NUP35Q8NFH5 326 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 DPF1Q92782 380 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 PLEKHA3Q9HB20 300 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 UNC13CQ8NB66 2214 aa16.81■□□□□ 0.28
RARA-201ENST00000254066 GGTLC3B5MD39 225 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 ABHD12Q8N2K0 398 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 SPXQ9BT56 116 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 OR7C2O60412 319 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 IGHV3-9P01782 118 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 CEACAM3P40198 252 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 WFDC8Q8IUA0 241 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 NHLRC2Q8NBF2 726 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 URB1-AS1Q96HZ7 61 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 ZNF835Q9Y2P0 537 aa16.8■□□□□ 0.28
RARA-201ENST00000254066 MYO15AQ9UKN7 3530 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 LEPROTL1O95214 131 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 GATA2P23769 480 aaPredicted RBP16.79■□□□□ 0.28
RARA-201ENST00000254066 GPR183P32249 361 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 FOXF2Q12947 444 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 TCF19Q9Y242 345 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 TRAV26-1A0A087WT03 109 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 A0A1B0GXF2 115 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 hDV102S1A0JD36 115 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 WDR86Q86TI4 376 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 ZNF503Q96F45 646 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 NABP2Q9BQ15 211 aa16.79■□□□□ 0.28
RARA-201ENST00000254066 C7orf71A4D174 169 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 COX6A1P12074 109 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 LPAL2Q16609 132 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 FAM168AQ92567 244 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 DUSP13Q9UII6 198 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 EP300Q09472 2414 aaPredicted RBP16.78■□□□□ 0.28
RARA-201ENST00000254066 ZNF503-AS2A6NEH8 195 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 PSPNO60542 156 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 ADH4P08319 380 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 C9orf135Q5VTT2 229 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 SARAFQ96BY9 339 aa16.78■□□□□ 0.28
RARA-201ENST00000254066 SOX21Q9Y651 276 aaPredicted RBP16.78■□□□□ 0.28
RARA-201ENST00000254066 CLEC3BP05452 202 aa16.77■□□□□ 0.28
RARA-201ENST00000254066 WIPI1Q5MNZ9 446 aaPredicted RBP16.77■□□□□ 0.28
RARA-201ENST00000254066 TRAT1Q6PIZ9 186 aa16.77■□□□□ 0.28
RARA-201ENST00000254066 SLC25A45Q8N413 288 aa16.77■□□□□ 0.28
RARA-201ENST00000254066 GCM1Q9NP62 436 aa16.77■□□□□ 0.28
RARA-201ENST00000254066 FCGR3BO75015 233 aa16.77■□□□□ 0.27
RARA-201ENST00000254066 SAP30O75446 220 aa16.77■□□□□ 0.27
RARA-201ENST00000254066 CA1P00915 261 aaPredicted RBP16.77■□□□□ 0.27
RARA-201ENST00000254066 HIST1H1EP10412 219 aaKnown RBP16.77■□□□□ 0.27
RARA-201ENST00000254066 MYF5P13349 255 aa16.77■□□□□ 0.27
RARA-201ENST00000254066 IGFBP2P18065 325 aa16.77■□□□□ 0.27
RARA-201ENST00000254066 DUSP3P51452 185 aaPredicted RBP16.77■□□□□ 0.27
RARA-201ENST00000254066 OR1B1Q8NGR6 318 aa16.77■□□□□ 0.27
RARA-201ENST00000254066 MAP1LC3CQ9BXW4 147 aa16.77■□□□□ 0.27
RARA-201ENST00000254066 IGHV1-24A0A0C4DH33 117 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 SMIM17P0DL12 118 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 KIR2DS2P43631 304 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 ZNF766Q5HY98 468 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 OR51B2Q9Y5P1 312 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 CEP192Q8TEP8 1941 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 VPS13AQ96RL7 3174 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 ZNF292O60281 2723 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 ZNHIT1O43257 154 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 COX8AP10176 69 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 NEGR1Q7Z3B1 354 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 PRR7Q8TB68 274 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 SNRNP40Q96DI7 357 aaKnown RBP16.76■□□□□ 0.27
RARA-201ENST00000254066 SSBP3Q9BWW4 388 aaPredicted RBP16.76■□□□□ 0.27
RARA-201ENST00000254066 ZNF355PQ9NSJ1 428 aa16.76■□□□□ 0.27
RARA-201ENST00000254066 H3BRM9 83 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 ACTL6BO94805 426 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 SPINK2P20155 84 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 MRPL32Q9BYC8 188 aaKnown RBP16.75■□□□□ 0.27
RARA-201ENST00000254066 IDI2-AS1Q9NZ38 188 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 PPIAL4GP0DN37 164 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 RAB9AP51151 201 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 GABRA6Q16445 453 aa16.75■□□□□ 0.27
RARA-201ENST00000254066 FAM53AQ6NSI3 398 aaPredicted RBP16.75■□□□□ 0.27
RARA-201ENST00000254066 H1FXQ92522 213 aaKnown RBP16.75■□□□□ 0.27
RARA-201ENST00000254066 GPR179Q6PRD1 2367 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 C9orf118A6NHY6 69 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 C8orf88P0DMB2 117 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 PF4V1P10720 104 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 GPR12P47775 334 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 AP1S3Q96PC3 154 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 TP73-AS1Q9UF72 201 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 HSPB8Q9UJY1 196 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 ASXL3Q9C0F0 2248 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 GPR6P46095 362 aaPredicted RBP16.74■□□□□ 0.27
RARA-201ENST00000254066 LINC00205P59089 165 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 AESQ08117 197 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 Q8TCH9 128 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 COQ2Q96H96 371 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 ARRDC1-AS1Q9H2J1 176 aa16.74■□□□□ 0.27
RARA-201ENST00000254066 DMDP11532 3685 aa16.73■□□□□ 0.27
RARA-201ENST00000254066 PPIAL4EA0A075B759 164 aa16.73■□□□□ 0.27
RARA-201ENST00000254066 PPIAL4CA0A0B4J2A2 164 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms