RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 PDLIM4P50479 330 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 C1orf210Q8IVY1 113 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 ADTRPQ96IZ2 230 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 DCTN5Q9BTE1 182 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 U3KQA8 63 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 NUP210LQ5VU65 1888 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 TMEM131Q92545 1883 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
CCDC117-201ENST00000249064 K7EQM0 130 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 GGNQ86UU5 652 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 FER1L6-AS1Q8NA97 138 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 AMMECR1Q9Y4X0 333 aaPredicted RBP11.09□□□□□ -0.63
CCDC117-201ENST00000249064 TNCP24821 2201 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 CEACAM21Q3KPI0 293 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 ZNF391Q9UJN7 358 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 TIMM9Q9Y5J7 89 aa11.09□□□□□ -0.63
CCDC117-201ENST00000249064 SIGMAR1Q99720 223 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 GNB1LQ9BYB4 327 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 JKAMPQ9P055 326 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 TRGV5A0A0B4J1U4 118 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 ADH4P08319 380 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 PNKDQ8N490 385 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
CCDC117-201ENST00000249064 H3BVH4 76 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 CELA3BP08861 270 aa11.08□□□□□ -0.64
CCDC117-201ENST00000249064 PPP1R35Q8TAP8 253 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 LOC105371242A0A075B767 164 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 WNT9BO14905 357 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 LGALS4P56470 323 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■□□□ 13.9
CCDC117-201ENST00000249064 SLC25A40Q8TBP6 338 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 RNF114Q9Y508 228 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 PIEZO2Q9H5I5 2752 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 LOC102723996A0A087X1L8 192 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 PAX2Q02962 417 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 TMEM177Q53S58 311 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 SLC35E4Q6ICL7 350 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
CCDC117-201ENST00000249064 RND1Q92730 232 aa11.07□□□□□ -0.64
CCDC117-201ENST00000249064 COLQQ9Y215 455 aaPredicted RBP11.07□□□□□ -0.64
CCDC117-201ENST00000249064 RPL30P62888 115 aaKnown RBP11.06□□□□□ -0.64
CCDC117-201ENST00000249064 SLAQ13239 276 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 MUC3AQ02505 3323 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 ATG2AQ2TAZ0 1938 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 A0A1W2PRE2 83 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 IGKV1-39P01597 117 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 IGKV1D-39P04432 117 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.06□□□□□ -0.64
CCDC117-201ENST00000249064 A1L4Q6 167 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 PGPA6NDG6 321 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 GNG5P63218 68 aa11.06□□□□□ -0.64
CCDC117-201ENST00000249064 KLF13Q9Y2Y9 288 aaPredicted RBP11.06□□□□□ -0.64
CCDC117-201ENST00000249064 FRYQ5TBA9 3013 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 PPIAL4EA0A075B759 164 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 K7EP13 123 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 PPIAL4FP0DN26 164 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 ESDP10768 282 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 PLGLAQ15195 96 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 LRRC10Q5BKY1 277 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 UBALD2Q8IYN6 164 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 POM121L2Q96KW2 1035 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 MED12LQ86YW9 2145 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 PPIAL4CA0A0B4J2A2 164 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 LOC107984156A0A0G2JMH3 177 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 FAM90A26D6RGX4 464 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 TGFAP01135 160 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 PPIAL4GP0DN37 164 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 CKS1BP61024 79 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 YPEL3P61236 119 aaPredicted RBP11.05□□□□□ -0.64
CCDC117-201ENST00000249064 EFNB3Q15768 340 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 ARL17AQ8IVW1 177 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 FER1L6-AS2Q96M78 137 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 BMI1P35226 326 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 OR10J3Q5JRS4 329 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 C18orf32Q8TCD1 76 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 SARAFQ96BY9 339 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 REPIN1Q9BWE0 567 aaKnown RBP11.05□□□□□ -0.64
CCDC117-201ENST00000249064 HES4Q9HCC6 221 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 WDFY4Q6ZS81 3184 aa11.05□□□□□ -0.64
CCDC117-201ENST00000249064 TRAV24A0A0B4J272 114 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 CT45A10P0DMU9 189 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 COL8A2P25067 703 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 RPL39P5Q59GN2 51 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 AP5S1Q9NUS5 200 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 J3QR06 171 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 DNPH1O43598 174 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
CCDC117-201ENST00000249064 B3GALT5-AS1P59052 145 aa11.04□□□□□ -0.64
CCDC117-201ENST00000249064 ZNF585BQ52M93 769 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms