RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 FCN1O00602 326 aa13.69□□□□□ -0.22
SSPN-201ENST00000242729 LYNX1P0DP58 116 aa13.69□□□□□ -0.22
SSPN-201ENST00000242729 RPL29P47914 159 aaKnown RBP13.69□□□□□ -0.22
SSPN-201ENST00000242729 PRCDQ00LT1 54 aa13.69□□□□□ -0.22
SSPN-201ENST00000242729 TMEM200BQ69YZ2 307 aa13.69□□□□□ -0.22
SSPN-201ENST00000242729 OR10X1Q8NGY0 326 aa13.69□□□□□ -0.22
SSPN-201ENST00000242729 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
SSPN-201ENST00000242729 EAF1Q96JC9 268 aaPredicted RBP13.69□□□□□ -0.22
SSPN-201ENST00000242729 FAM103A1Q9BTL3 118 aaKnown RBP13.69□□□□□ -0.22
SSPN-201ENST00000242729 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 H3BTX0 84 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 TYMSP04818 313 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 GNG4P50150 75 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 DMRTC2Q8IXT2 367 aaPredicted RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 SSBP3Q9BWW4 388 aaPredicted RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 MRPL18Q9H0U6 180 aaKnown RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 SAP30LQ9HAJ7 183 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 PRNDQ9UKY0 176 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 hADV38S2A0JD32 116 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 ZNF705FA8MVS1 300 aaPredicted RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 ZNF705DP0CH99 300 aaPredicted RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 ZNF705BP0CI00 300 aaPredicted RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 TDRG1Q3Y452 100 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 FAM169BQ8N8A8 192 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 ABHD17AQ96GS6 310 aa13.68□□□□□ -0.22
SSPN-201ENST00000242729 MRPL36Q9P0J6 103 aaKnown RBP13.68□□□□□ -0.22
SSPN-201ENST00000242729 SNURFLB1AK76 121 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 GATCO43716 136 aaKnown RBP13.67□□□□□ -0.22
SSPN-201ENST00000242729 GATA4P43694 442 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 LCN2P80188 198 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 MMD2Q8IY49 270 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 RPH3ALQ9UNE2 315 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 RNASE2P10153 161 aaKnown RBP13.67□□□□□ -0.22
SSPN-201ENST00000242729 FOXL1Q12952 345 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 TMEM108Q6UXF1 575 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 OR5R1Q8NH85 324 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 MS4A10Q96PG2 267 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 TP53TG3Q9ULZ0 132 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 COL6A6A6NMZ7 2263 aa13.67□□□□□ -0.22
SSPN-201ENST00000242729 COA6Q5JTJ3 125 aaKnown RBP13.66□□□□□ -0.22
SSPN-201ENST00000242729 LURAP1LQ8IV03 231 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 ST6GALNAC3Q8NDV1 305 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 ATG101Q9BSB4 218 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 FKBP11Q9NYL4 201 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 ARHGAP32A7KAX9 2087 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 SLC25A17O43808 307 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 SERF1AO75920 110 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 PDLIM4P50479 330 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 REC114Q7Z4M0 266 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 C1orf174Q8IYL3 243 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 NPIPB3Q92617 1050 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 ZNF714Q96N38 554 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 C17orf100A8MU93 164 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 A8MWP6 167 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 C16orf97H3BN30 126 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 WT1-ASQ06250 92 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 PRR27Q6MZM9 219 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
SSPN-201ENST00000242729 SFXN3Q9BWM7 321 aa13.66□□□□□ -0.22
SSPN-201ENST00000242729 FNDC4Q9H6D8 234 aaPredicted RBP13.66□□□□□ -0.22
SSPN-201ENST00000242729 RALYQ9UKM9 306 aaKnown RBP13.66□□□□□ -0.22
SSPN-201ENST00000242729 ANKHD1Q8IWZ3 2542 aaKnown RBP13.65□□□□□ -0.22
SSPN-201ENST00000242729 MT-CO2P00403 227 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 MOSP00540 346 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 THBDP07204 575 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 RPL8P62917 257 aaKnown RBP13.65□□□□□ -0.22
SSPN-201ENST00000242729 BAGE3Q86Y29 109 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 BAGE2Q86Y30 109 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 CMTM2Q8TAZ6 248 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 FAM57AQ8TBR7 257 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 FAM168AQ92567 244 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 FLYWCH2Q96CP2 140 aaKnown RBP13.65□□□□□ -0.22
SSPN-201ENST00000242729 IL36BQ9NZH7 164 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 H0YJW9 148 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 OR5G3P0C626 314 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 CD99P14209 185 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 UBE2L3P68036 154 aaKnown RBP13.65□□□□□ -0.22
SSPN-201ENST00000242729 ZNF600Q6ZNG1 722 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 ADTRPQ96IZ2 230 aa13.65□□□□□ -0.22
SSPN-201ENST00000242729 GSX1Q9H4S2 264 aaPredicted RBP13.65□□□□□ -0.22
SSPN-201ENST00000242729 NKX6-3A6NJ46 265 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 CRISP2P16562 243 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 CNTFRP26992 372 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 CEACAM8P31997 349 aaPredicted RBP13.64□□□□□ -0.23
SSPN-201ENST00000242729 CDKN1AP38936 164 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 LINC00310P59036 64 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.64□□□□□ -0.23
SSPN-201ENST00000242729 OR5AU1Q8NGC0 362 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 BLNKQ8WV28 456 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 PTPRQQ9UMZ3 2332 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 SPTBN1Q01082 2364 aaKnown RBP13.64□□□□□ -0.23
SSPN-201ENST00000242729 EREGO14944 169 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 APOA2P02652 100 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 RPEL1Q2QD12 228 aa13.64□□□□□ -0.23
SSPN-201ENST00000242729 TECRQ9NZ01 308 aaKnown RBP13.64□□□□□ -0.23
SSPN-201ENST00000242729 CTSZQ9UBR2 303 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms