RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RAXQ9Y2V3 346 aa10.77□□□□□ -0.69
VAMP4-201ENST00000236192 LEPP41159 167 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 RPS19BP1Q86WX3 136 aaKnown RBP10.76□□□□□ -0.69
VAMP4-201ENST00000236192 SPXQ9BT56 116 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 SPANXDQ9BXN6 97 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 BEX4Q9NWD9 120 aaPredicted RBP10.76□□□□□ -0.69
VAMP4-201ENST00000236192 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 KLF5Q13887 457 aaPredicted RBP10.76□□□□□ -0.69
VAMP4-201ENST00000236192 TMEM178AQ8NBL3 297 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 COQ2Q96H96 371 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 LYZL4Q96KX0 146 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 TMEM126AQ9H061 195 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 LGALS3P17931 250 aaKnown RBP10.76□□□□□ -0.69
VAMP4-201ENST00000236192 TREML4Q6UXN2 200 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 RNF144BQ7Z419 303 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
VAMP4-201ENST00000236192 ZNF146Q15072 292 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 CENPVQ7Z7K6 275 aaPredicted RBP10.75□□□□□ -0.69
VAMP4-201ENST00000236192 RND1Q92730 232 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 DECR2Q9NUI1 292 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 UBR3Q6ZT12 1888 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 CD40P25942 277 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 MFAP4P55083 255 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 PSG4Q00888 419 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 PPP1R27Q86WC6 154 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 FOXS1O43638 330 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 PLAUP00749 431 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 EVI2AP22794 236 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 DRD3P35462 400 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 KLRD1Q13241 179 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 C16orf47Q6ZP98 133 aaPredicted RBP10.75□□□□□ -0.69
VAMP4-201ENST00000236192 CXorf67Q86X51 503 aaPredicted RBP10.75□□□□□ -0.69
VAMP4-201ENST00000236192 OR1L8Q8NGR8 309 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 ZIC3O60481 467 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 NDUFA3O95167 84 aa10.75□□□□□ -0.69
VAMP4-201ENST00000236192 SCARF2Q96GP6 870 aaPredicted RBP10.75□□□□□ -0.69
VAMP4-201ENST00000236192 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 S100A4P26447 101 aaKnown RBP10.74□□□□□ -0.69
VAMP4-201ENST00000236192 PPP1CAP62136 330 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 IGLV3-21P80748 117 aaPredicted RBP10.74□□□□□ -0.69
VAMP4-201ENST00000236192 GTSCR1Q86UQ5 136 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 RNF183Q96D59 192 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 C17orf98A8MV24 154 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 INO80CQ6PI98 192 aaPredicted RBP10.74□□□□□ -0.69
VAMP4-201ENST00000236192 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 C12orf49Q9H741 205 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 TDRD15B5MCY1 1934 aaKnown RBP10.74□□□□□ -0.69
VAMP4-201ENST00000236192 SH2D6Q7Z4S9 175 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 OR4C13Q8NGP0 309 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
VAMP4-201ENST00000236192 SPINK2P20155 84 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 GFERP55789 205 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 C10orf128Q5T292 105 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 PPP1R32Q7Z5V6 425 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 SCN2AQ99250 2005 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 PARP14Q460N5 1801 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 MOSP00540 346 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 FCGR2BP31994 310 aaPredicted RBP10.73□□□□□ -0.69
VAMP4-201ENST00000236192 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 RAX2Q96IS3 184 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 PLXNA1Q9UIW2 1896 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 SIGLEC8Q9NYZ4 499 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 CASP8AP2Q9UKL3 1982 aa10.73□□□□□ -0.69
VAMP4-201ENST00000236192 ZNF138P52744 262 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 C5orf47Q569G3 176 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 ZC2HC1AQ96GY0 325 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 CYYR1Q96J86 154 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 FOXH1O75593 365 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 RAC3P60763 192 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 MBNL2Q5VZF2 373 aaKnown RBP10.72□□□□□ -0.69
VAMP4-201ENST00000236192 SLC25A48Q6ZT89 311 aaKnown RBP10.72□□□□□ -0.69
VAMP4-201ENST00000236192 K7EQS6 105 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 EFEMP2O95967 443 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 VDAC2P45880 294 aaPredicted RBP10.72□□□□□ -0.69
VAMP4-201ENST00000236192 CEND1Q8N111 149 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 MGST2Q99735 147 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 FNDC10F2Z333 226 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 C17orf99Q6UX52 265 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 GOLT1AQ6ZVE7 132 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 LINC00305Q7Z4B0 112 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 OR10J6PQ8NGY7 276 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 TMEM74BQ9NUR3 256 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 SBF1O95248 1867 aa10.72□□□□□ -0.69
VAMP4-201ENST00000236192 LGALS9BQ3B8N2 356 aa10.71□□□□□ -0.69
VAMP4-201ENST00000236192 LGALS9CQ6DKI2 356 aa10.71□□□□□ -0.69
VAMP4-201ENST00000236192 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.69
VAMP4-201ENST00000236192 PRSS57Q6UWY2 283 aa10.71□□□□□ -0.69
VAMP4-201ENST00000236192 ZNF296Q8WUU4 475 aaPredicted RBP10.71□□□□□ -0.69
VAMP4-201ENST00000236192 ZNF831Q5JPB2 1677 aa10.71□□□□□ -0.69
VAMP4-201ENST00000236192 LOC102723996A0A087X1L8 192 aa10.71□□□□□ -0.69
VAMP4-201ENST00000236192 CELA3BP08861 270 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms