RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ENY2Q9NPA8 101 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
LSM5-201ENST00000223084 A0A0B4J2A0 478 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 CENPXA8MT69 81 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 F8W735 103 aaPredicted RBP9.65□□□□□ -0.86
LSM5-201ENST00000223084 I3L2K1 104 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 SFT2D2O95562 160 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 SULT1A3P0DMM9 295 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 SULT1A4P0DMN0 295 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 SPCS3P61009 180 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 SRPXP78539 464 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 NMSQ5H8A3 153 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 ADAMTSL5Q6ZMM2 481 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 UBAC2Q8NBM4 344 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 ZNF114Q8NC26 417 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 PINX1Q96BK5 328 aaKnown RBP9.65□□□□□ -0.86
LSM5-201ENST00000223084 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 ZMAT5Q9UDW3 170 aaKnown RBP9.65□□□□□ -0.86
LSM5-201ENST00000223084 SHPKQ9UHJ6 478 aa9.65□□□□□ -0.86
LSM5-201ENST00000223084 ZNF320A2RRD8 509 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 INS-IGF2F8WCM5 200 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 LYRM1O43325 122 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 TGOLN2O43493 480 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 MT-CO2P00403 227 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 IGLV1-51P01701 117 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
LSM5-201ENST00000223084 ANXA7P20073 488 aaKnown RBP9.64□□□□□ -0.87
LSM5-201ENST00000223084 SNCAP37840 140 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 Q56UQ5 140 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 PLET1Q6UQ28 207 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 GPHB5Q86YW7 130 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 OR52E5Q8NH55 327 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 S100ZQ8WXG8 99 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
LSM5-201ENST00000223084 CHRDL1Q9BU40 450 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 SELENOKQ9Y6D0 94 aa9.64□□□□□ -0.87
LSM5-201ENST00000223084 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 SMCO1Q147U7 214 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 UNQ9165/PRO28630Q6UXU0 137 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
LSM5-201ENST00000223084 WDR12Q9GZL7 423 aaKnown RBP9.63□□□□□ -0.87
LSM5-201ENST00000223084 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 LGALS9O00182 355 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 HOXB5P09067 269 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 GP9P14770 177 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 ADMP35318 185 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 SUB1P53999 127 aaKnown RBP eCLIP9.62□□□□□ -0.872e-7■■■■□ 24.9
LSM5-201ENST00000223084 MLANAQ16655 118 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 TM4SF20Q53R12 229 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 PVRIGQ6DKI7 326 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 LRTM2Q8N967 370 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 OR1S1Q8NH92 325 aa9.62□□□□□ -0.87
LSM5-201ENST00000223084 BSCL2Q96G97 398 aaPredicted RBP9.62□□□□□ -0.87
LSM5-201ENST00000223084 HEYLQ9NQ87 328 aaPredicted RBP9.62□□□□□ -0.87
LSM5-201ENST00000223084 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 A0A1B0GU03 582 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 TMEM213A2RRL7 107 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 IZUMO1RA6ND01 250 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 CTSGP08311 255 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 OR4E1P0C645 316 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 FOLR2P14207 255 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 MFAP4P55083 255 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
LSM5-201ENST00000223084 TNFRSF9Q07011 255 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 DHRS2Q13268 280 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 BSXQ3C1V8 233 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 SPSB3Q6PJ21 355 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 ZNF414Q96IQ9 312 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 ZNF436Q9C0F3 470 aaPredicted RBP9.61□□□□□ -0.87
LSM5-201ENST00000223084 RBKSQ9H477 322 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 FNDC4Q9H6D8 234 aaPredicted RBP9.61□□□□□ -0.87
LSM5-201ENST00000223084 SIGLEC8Q9NYZ4 499 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
LSM5-201ENST00000223084 TBC1D24Q9ULP9 559 aa9.61□□□□□ -0.87
LSM5-201ENST00000223084 LSM4Q9Y4Z0 139 aaKnown RBP9.61□□□□□ -0.87
LSM5-201ENST00000223084 TRAV6A0A075B6T7 132 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 PITX3O75364 302 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 ADAP1O75689 374 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 TCRBP04435 133 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 CBLN1P23435 193 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 HTR2BP41595 481 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 ZNF846Q147U1 533 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 CD300EQ496F6 205 aaPredicted RBP9.6□□□□□ -0.87
LSM5-201ENST00000223084 C4orf46Q504U0 113 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 LYG2Q86SG7 212 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 OR52B4Q8NGK2 314 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 DYNLRB2Q8TF09 96 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 TMEM170AQ8WVE7 144 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 ATP6V0BQ99437 205 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 C20orf85Q9H1P6 137 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 HSPB7Q9UBY9 170 aa9.6□□□□□ -0.87
LSM5-201ENST00000223084 A8MWP6 167 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms