RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 A0A1B0GW15 77 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 K7ERU9 68 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 NTN3O00634 580 aaPredicted RBP8.82□□□□□ -1
TRPS1-201ENST00000220888 YPEL1O60688 119 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 CGAP01215 116 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 FHITP49789 147 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 C1QL2Q7Z5L3 287 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 YPEL2Q96QA6 119 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
TRPS1-201ENST00000220888 PIP4P2Q8N4L2 257 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 PSMG3Q9BT73 122 aaPredicted RBP8.82□□□□□ -1
TRPS1-201ENST00000220888 CST9LQ9H4G1 147 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 OTORQ9NRC9 128 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 RNF223E7ERA6 249 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 TTC32Q5I0X7 151 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 MINOS1Q5TGZ0 78 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 C8orf82Q6P1X6 216 aaPredicted RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 SIGLEC15Q6ZMC9 328 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 MINOS1-NBL1R4GNA1 71 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 WISP3O95389 354 aaPredicted RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 EFNB1P98172 346 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 TBL2Q9Y4P3 447 aaKnown RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 ESPL1Q14674 2120 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 LINC01590Q5TEZ4 76 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 RARRES2Q99969 163 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 DEPPQ9NTK1 212 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 MDC1Q14676 2089 aaKnown RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 PLXNB2O15031 1838 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 SCN4AP35499 1836 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 LAMA4Q16363 1823 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 C1QTNF9BB2RNN3 333 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 TTC9CQ8N5M4 171 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 ZNF257Q9Y2Q1 563 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 CCDC88CQ9P219 2028 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 OOSP1A8MZH6 123 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 C1QCP02747 245 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 RCHY1Q96PM5 261 aa8.81□□□□□ -1
TRPS1-201ENST00000220888 RPP21Q9H633 154 aaKnown RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 MRPL16Q9NX20 251 aaKnown RBP8.81□□□□□ -1
TRPS1-201ENST00000220888 TRGV1A0A0A0MS02 117 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 TGIF2-C20orf24A0A0A6YYL0 155 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 F8WEM9 126 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 CD28P10747 220 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 RIPPLY3P57055 190 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 FOXF2Q12947 444 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 JPT2Q9H910 190 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 COL18A1P39060 1754 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 SIGLEC5O15389 551 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 SEPSECSQ9HD40 501 aaKnown RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 SPTBP11277 2137 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 APOHP02749 345 aaPredicted RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 PKIAP61925 76 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 SPTBN1Q01082 2364 aaKnown RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 TNS1Q9HBL0 1735 aaKnown RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 RPL36AP83881 106 aaKnown RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 C10orf126Q8N4M7 172 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 FAM89BQ8N5H3 189 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 RPL36ALQ969Q0 106 aaKnown RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 SLC25A38Q96DW6 304 aa8.8□□□□□ -1
TRPS1-201ENST00000220888 ZNF837Q96EG3 531 aaPredicted RBP8.8□□□□□ -1
TRPS1-201ENST00000220888 PSPNO60542 156 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 NEUROG1Q92886 237 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 KIAA1551Q9HCM1 1747 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 NDUFS8O00217 210 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 TRGC2P03986 189 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 RND3P61587 244 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 ORMDL3Q8N138 153 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 NRN1Q9NPD7 142 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 ELF5Q9UKW6 265 aaPredicted RBP8.79□□□□□ -1
TRPS1-201ENST00000220888 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
TRPS1-201ENST00000220888 SMIM13P0DJ93 91 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 WBP1Q96G27 269 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 TM2D1Q9BX74 207 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 PLSCR4Q9NRQ2 329 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 UQCR10Q9UDW1 63 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 IGHV2-26A0A0B4J1V2 119 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 PQLC2LA1A4F0 135 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 PIN1P1O15428 100 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 STAG3L3P0CL85 134 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 GATA2P23769 480 aaPredicted RBP8.79□□□□□ -1
TRPS1-201ENST00000220888 LINC00158P58513 81 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 RNF182Q8N6D2 247 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 PLPPR1Q8TBJ4 325 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 WFDC6Q9BQY6 131 aa8.79□□□□□ -1
TRPS1-201ENST00000220888 C15orf61A6NNL5 157 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 GCM2O75603 506 aaPredicted RBP8.78□□□□□ -1
TRPS1-201ENST00000220888 PRCDQ00LT1 54 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 MORN2Q502X0 79 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 ZNF506Q5JVG8 444 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 TMEM144Q7Z5S9 345 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 NR2C2APQ86WQ0 139 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 OR1P1Q8NH06 330 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 C15orf32Q32M92 178 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 Q96MF0 132 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 SLC25A15Q9Y619 301 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms