RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ZNF439Q8NDP4 499 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 C1orf159Q96HA4 380 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 LRFN3Q9BTN0 628 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 SAMD10Q9BYL1 202 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 ABCA1O95477 2261 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 J3QR06 171 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 STAG3L2P0CL84 134 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 STAG3L3P0CL85 134 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 LYNX1P0DP58 116 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 CRISP2P16562 243 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 IGFBP2P18065 325 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 TNFRSF1AP19438 455 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 GCHFRP30047 84 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 HSPE1P61604 102 aaKnown RBP10.71□□□□□ -0.7
CTNS-201ENST00000046640 OR8I2Q8N0Y5 310 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 STPG3Q8N7X2 389 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 PPP1R14DQ9NXH3 145 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.7
CTNS-201ENST00000046640 TP53TG3Q9ULZ0 132 aa10.71□□□□□ -0.7
CTNS-201ENST00000046640 hADV38S2A0JD32 116 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 SNURFLB1AK76 121 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 OR10J4P0C629 311 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 OPRK1P41145 380 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 FOXL1Q12952 345 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 EFNB3Q15768 340 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 TMEM200BQ69YZ2 307 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 MRPL20Q9BYC9 149 aaKnown RBP10.7□□□□□ -0.7
CTNS-201ENST00000046640 PRSS46E5RG02 174 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 OR10J1P30954 320 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 TBR1Q16650 682 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 NUP37Q8NFH4 326 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 TMEM208Q9BTX3 173 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 RNASE7Q9H1E1 156 aaKnown RBP10.7□□□□□ -0.7
CTNS-201ENST00000046640 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 SVEP1Q4LDE5 3571 aa10.7□□□□□ -0.7
CTNS-201ENST00000046640 TRGV8A0A0C4DH27 118 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 NPSP0C0P6 89 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 CRYBB3P26998 211 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 CHRNB4P30926 498 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 PSG5Q15238 335 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 TMEM14BQ9NUH8 114 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 PPIAL4EA0A075B759 164 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 NKX6-3A6NJ46 265 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 PPIAL4DF5H284 164 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 PPIAL4FP0DN26 164 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 RAB4AP20338 218 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 KIR2DS2P43631 304 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 KRTDAPP60985 99 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 SLC25A48Q6ZT89 311 aaKnown RBP10.69□□□□□ -0.7
CTNS-201ENST00000046640 OR52E5Q8NH55 327 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 DIRC2Q96SL1 478 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 NPVFQ9HCQ7 196 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 SERTAD4Q9NUC0 356 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 PPIAL4AQ9Y536 164 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 NAV3Q8IVL0 2385 aa10.69□□□□□ -0.7
CTNS-201ENST00000046640 ASH1LQ9NR48 2969 aaKnown RBP10.69□□□□□ -0.7
CTNS-201ENST00000046640 IGHV3-72A0A0B4J1Y9 119 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 PLAUP00749 431 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 SAA1P0DJI8 122 aaPredicted RBP10.68□□□□□ -0.7
CTNS-201ENST00000046640 LINC00310P59036 64 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 PQLC2Q6ZP29 291 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 LINC01560Q8TB33 94 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 PLEKHA3Q9HB20 300 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 CHD8Q9HCK8 2581 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 E7EUB6 86 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 APELAP0DMC3 54 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
CTNS-201ENST00000046640 AARDQ4LEZ3 155 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 C10orf55Q5SWW7 151 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 TEX36Q5VZQ5 186 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 TEPPQ6URK8 271 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 ZNF714Q96N38 554 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 TMEM106BQ9NUM4 274 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 RNF114Q9Y508 228 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 MALRD1Q5VYJ5 2156 aa10.68□□□□□ -0.7
CTNS-201ENST00000046640 DLEU1O43261 78 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 OR7C2O60412 319 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 TPPP2P59282 170 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 RTL8BQ17RB0 113 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 MMD2Q8IY49 270 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 OR10X1Q8NGY0 326 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 HARBI1Q96MB7 349 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 UHRF2Q96PU4 802 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 RAB9BQ9NP90 201 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 CTSZQ9UBR2 303 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 RALYQ9UKM9 306 aaKnown RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 FOXA2Q9Y261 457 aaPredicted RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 MED13LQ71F56 2210 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 NCOR2Q9Y618 2525 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 TEX50A0A1B0GTY4 177 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 FAM90A9PA6NNJ1 464 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms