RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 C6orf62Q9GZU0 229 aaPredicted RBP11.69□□□□□ -0.54
ERCC1-201ENST00000013807 VSIRQ9H7M9 311 aa11.69□□□□□ -0.54
ERCC1-201ENST00000013807 CXorf65A6NEN9 183 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 GNG7O60262 68 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 RORCP51449 518 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 SNX29P2Q8IUI4 249 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 APRG1Q8IVJ8 170 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 ARRDC1Q8N5I2 433 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 CSTL1Q9H114 145 aa11.68□□□□□ -0.54
ERCC1-201ENST00000013807 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 A0A0B4J293 547 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 HPGDSO60760 199 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 YIF1AO95070 293 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
ERCC1-201ENST00000013807 TBPP20226 339 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 NPBWR1P48145 328 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 VBP1P61758 197 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 DUSP18Q8NEJ0 188 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
ERCC1-201ENST00000013807 KLK5Q9Y337 293 aaPredicted RBP11.67□□□□□ -0.54
ERCC1-201ENST00000013807 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 DFFBO76075 338 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 TMEM50AO95807 157 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 PIGPP57054 158 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 PAFAH1B2P68402 229 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 ZNF600Q6ZNG1 722 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 KLK11Q9UBX7 282 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 MTFP1Q9UDX5 166 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 KMT2AQ03164 3969 aa11.66□□□□□ -0.54
ERCC1-201ENST00000013807 M0QYG6 137 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 CORTO00230 105 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 B3GALNT1O75752 331 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 ATG12O94817 140 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 SNCAP37840 140 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 RPL5P46777 297 aaKnown RBP11.65□□□□□ -0.54
ERCC1-201ENST00000013807 PMS2P11Q13670 270 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 ZNF124Q15973 351 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 BSXQ3C1V8 233 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 AARDQ4LEZ3 155 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 RNASE10Q5GAN6 216 aaKnown RBP11.65□□□□□ -0.54
ERCC1-201ENST00000013807 MZT2AQ6P582 158 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 LILRB2Q8N423 598 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 TERB2Q8NHR7 220 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 C15orf40Q8WUR7 153 aa11.65□□□□□ -0.54
ERCC1-201ENST00000013807 FRAS1Q86XX4 4008 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 IGHV3-49A0A0A0MS15 119 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 C3orf85A0A1B0GTC6 90 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 LY6G6CO95867 125 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 CD74P04233 296 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 CD3DP04234 171 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
ERCC1-201ENST00000013807 UCP1P25874 307 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 SUB1P53999 127 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERCC1-201ENST00000013807 CTF1Q16619 201 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 TCF24Q7RTU0 167 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 AP3S1Q92572 193 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 PINX1Q96BK5 328 aaKnown RBP11.64□□□□□ -0.55
ERCC1-201ENST00000013807 ABHD1Q96SE0 405 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 RARRES2Q99969 163 aa11.64□□□□□ -0.55
ERCC1-201ENST00000013807 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
ERCC1-201ENST00000013807 APOHP02749 345 aaPredicted RBP11.63□□□□□ -0.55
ERCC1-201ENST00000013807 ZNF182P17025 639 aaPredicted RBP11.63□□□□□ -0.55
ERCC1-201ENST00000013807 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
ERCC1-201ENST00000013807 OR52I2Q8NH67 350 aa11.63□□□□□ -0.55
ERCC1-201ENST00000013807 ZFAND1Q8TCF1 268 aa11.63□□□□□ -0.55
ERCC1-201ENST00000013807 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
ERCC1-201ENST00000013807 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
ERCC1-201ENST00000013807 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
ERCC1-201ENST00000013807 A0A1B0GU03 582 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 CLN5O75503 358 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 GABARAPO95166 117 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 CDS2O95674 445 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 PGAM2P15259 253 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 PI3P19957 117 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 TFPI2P48307 235 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 SSBP1Q04837 148 aaKnown RBP11.62□□□□□ -0.55
ERCC1-201ENST00000013807 LGALS9CQ6DKI2 356 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 TMEM229BQ8NBD8 167 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
ERCC1-201ENST00000013807 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
ERCC1-201ENST00000013807 IGHV3OR16-13A0A075B7E8 117 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 IGHV3-74A0A0B4J1X5 117 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 A0A1W2PS18 150 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 FAM25AB3EWG3 89 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 FAM25CB3EWG5 89 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 FAM25GB3EWG6 89 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 IFNA17P01571 189 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 CRYBB3P26998 211 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 ETV6P41212 452 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 AKR1C2P52895 323 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 FAM219AQ8IW50 185 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms