RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 KLF12Q9Y4X4 402 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 CPAMD8Q8IZJ3 1885 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 RRHO14718 337 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 DUTP33316 252 aaKnown RBP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 LAGE3Q14657 143 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 KIAA1644Q3SXP7 199 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 SPRED2Q7Z698 418 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 NEU1Q99519 415 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 SLC25A39Q9BZJ4 359 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM106BQ9NUM4 274 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 PAX2Q02962 417 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 SLC25A47Q6Q0C1 308 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 ATOH7Q8N100 152 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 SMRP1Q8NCR6 262 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 DPM3Q9P2X0 92 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 CCL27Q9Y4X3 112 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 TRAV8-2A0A0B4J237 113 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 EFNB1P98172 346 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 FER1L6-AS1Q8NA97 138 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 SPINK14Q6IE38 97 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 AGMATQ9BSE5 352 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 EIF3GO75821 320 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 DRD3P35462 400 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF585BQ52M93 769 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 BCL6BQ8N143 479 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 AMER3Q8N944 861 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM229AB2RXF0 380 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 OVOL1O14753 267 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 RCC1LQ96I51 464 aaKnown RBP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 LOC105371242A0A075B767 164 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 GCHFRP30047 84 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 SCARF2Q96GP6 870 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-201ENST00000011700 RFLNAQ6ZTI6 216 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM170AQ8WVE7 144 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 NRN1Q9NPD7 142 aa5.17□□□□□ -1.58
VPS13D-201ENST00000011700 LEPROTO15243 131 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 MOSP00540 346 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM42Q69YG0 159 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TTTY12Q9BZ98 90 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TLNRD1Q9H1K6 362 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 H7C2G1 150 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 Q6ZS52 159 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 PPIAL4CA0A0B4J2A2 164 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 F8WEM9 126 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 AMBPP02760 352 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 PPIAL4GP0DN37 164 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 CBLN3Q6UW01 205 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 ADRA2AP08913 450 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 C9orf40Q8IXQ3 194 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 BMPERQ8N8U9 685 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 PGLYRP4Q96LB8 373 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 VGLL1Q99990 258 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 DCTN5Q9BTE1 182 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 SLURP2P0DP57 97 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 CTHRC1Q96CG8 243 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM160Q9NX00 188 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TRAV8-4A0A0B4J246 113 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 WISP3O95389 354 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-201ENST00000011700 COL9A1P20849 921 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM167AQ8TBQ9 72 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 USMG5Q96IX5 58 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TINAGQ9UJW2 476 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV1-45A0A0A0MS14 117 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 TRBV7-1A0A0A6YYK4 115 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 RIPPLY3P57055 190 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 OR5AN1Q8NGI8 311 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 ZPLD1Q8TCW7 415 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 LRP4O75096 1905 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV1-69-2A0A0G2JMI3 117 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 GATA3P23771 443 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 P2RY4P51582 365 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 IFITM3Q01628 133 aa5.16□□□□□ -1.58
VPS13D-201ENST00000011700 MRPS18BQ9Y676 258 aaKnown RBP5.16□□□□□ -1.58
VPS13D-201ENST00000011700 C3AR1Q16581 482 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 WDR82Q6UXN9 313 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 TSKUQ8WUA8 353 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 CKS1BP61024 79 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 UNQ5815/PRO19632Q6UWF5 114 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 C21orf62Q9NYP8 219 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM14DPA8MWL7 114 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 CCL21O00585 134 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 CEACAM1P13688 526 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM187Q14656 261 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 GUSBP11Q6P575 273 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 DUX5Q96PT3 197 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 CCL19Q99731 98 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 COQ2Q96H96 371 aa5.15□□□□□ -1.58
VPS13D-201ENST00000011700 FN1P02751 2386 aaKnown RBP5.15□□□□□ -1.58
VPS13D-201ENST00000011700 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-201ENST00000011700 GOLT1AQ6ZVE7 132 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 PATE1Q8WXA2 126 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 C1QTNF5Q9BXJ0 243 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 RND2P52198 227 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 LINC00469Q8N7U9 141 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 MSL2Q9HCI7 577 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 SEPSECSQ9HD40 501 aaKnown RBP5.15□□□□□ -1.59
VPS13D-201ENST00000011700 C2CD4DB7Z1M9 353 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 NTN1O95631 604 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 233.6 ms