RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Saxo2Q8BQB6 394 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Znf385aQ8VD12 386 aaKnown RBP6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Tmem219Q9D123 240 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm13083A2AGW5 501 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 9130204L05RikG3UWB8 92 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 P01664 111 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Npas1P97459 594 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Parp16Q7TMM8 322 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 PimregQ8BFY7 231 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 CmblQ8R1G2 245 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Mic13Q8R404 119 aaKnown RBP6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr669Q8VGU9 317 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 ManbalQ9D8X0 85 aa6.13□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Ighv1-37A0A0A6YW32 117 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm5901D3YVJ1 333 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 P06344 263 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 CebpbP28033 296 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Scarb1Q61009 509 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Sf3a2Q62203 475 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Oxgr1Q6IYF8 337 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Atpaf1Q811I0 324 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Flywch1Q8CI03 673 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr509Q8VF20 321 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr1457Q8VFK3 317 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Q9D1K7 174 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Tmem239Q9DA47 151 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Six6Q9QZ28 246 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 PrnA0A075B668 197 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 A930017K11RikE0CXQ2 571 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Trav13d-3J3QMG8 112 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Lgals1P16045 135 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Foxk1P42128 719 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 ElnP54320 860 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm10447Q3UQ92 135 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Hs3st6Q5GFD5 342 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 A930004D18RikQ8C8W7 157 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Fahd1Q8R0F8 227 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr1279Q8VF38 313 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Lims1Q99JW4 325 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Tmem218Q9CQ44 115 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Q9CQT9 129 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gar1Q9CY66 231 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 PrndQ9QUG3 179 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Try5Q9QUK9 246 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Try4Q9R0T7 246 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Aifm1Q9Z0X1 612 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Scn1aA2APX8 2009 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Ighv6-6A0A075B5T3 119 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Trbv23A0A0A6YWQ1 115 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Lrrc29A0A1B0GQY9 621 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Zfp979A2A799 407 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Bet1lO35153 111 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Xaf1Q5NBU8 273 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Yipf6Q8BR70 236 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Mrps16Q9CPX7 135 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr943Q9EQ92 314 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Plp2Q9R1Q7 152 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Ighv7-1A0A075B5S2 121 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 MyadmO35682 320 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 P01667 111 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Cryba1P02525 198 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Prss33Q80WM7 277 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 AspaQ8R3P0 312 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Clec2dQ91V08 207 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Naa60Q9DBU2 242 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm28171A0A087WQ19 227 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm5890A0A140LI04 305 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Fam53aE9PV82 402 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm5225J3QPL3 108 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr906K7N5P3 311 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 H3f3cP02301 136 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Il4P07750 140 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Pcp2P12660 120 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Pax2P32114 414 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 H3f3aP84244 136 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Nudcd2Q9CQ48 157 aa6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Rtp4Q9ER80 249 aaKnown RBP6.12□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Prr32A2AFE9 284 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Slc35d1A2AKQ0 355 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 BC048679D3YXE9 172 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm14548E9Q1Z6 680 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Prr23a1G3UW32 258 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Egr1P08046 533 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Prrx2Q06348 247 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm14851Q5ERJ0 116 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr1042Q7TR81 313 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr876Q7TRE4 310 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 H2-M10.4Q85ZW8 331 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Wdfy2Q8BUB4 400 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Sbf1Q6ZPE2 1867 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Igkv1-135A0A0B4J1H7 120 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 AgmatA2AS89 358 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr1109A2AT96 312 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm572B1ARY8 399 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Gm6569D3YTM9 175 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Tex45G3XA23 500 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Cldn34c3J3QJW5 233 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Esp3J3QN49 87 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 Olfr1331K7N684 317 aa6.11□□□□□ -1.43
Scn1a-202ENSMUST00000094951 DhodhO35435 395 aa6.11□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 88.7 ms