RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Gm3486L7N2D0 199 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Igh-3P01867 404 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tmprss12Q3V0Q7 336 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Rasl2-9Q61820 216 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tle1Q62440 770 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Zfp455Q7M6X9 461 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr1299Q7TQX5 312 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Hspa12aQ8K0U4 675 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Mbnl3Q8R003 342 aaKnown RBP6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr772Q8VGC5 311 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tbx19Q99ME7 446 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Phf19Q9CXG9 578 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Kcnmb2Q9CZM9 235 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Mrpl13Q9D1P0 178 aaKnown RBP6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Zfpl1Q9DB43 310 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Ndufb10Q9DCS9 176 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Chst1Q9EQC0 411 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Shank1D3YZU1 2167 aa6.12□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Igkv12-89A0A0G2JGW8 112 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Vmn1r180B9EK86 305 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Zfp867E9Q2M4 473 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Cited2O35740 269 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Ifna7P06799 190 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 GusbP12265 648 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Pcgf2P23798 342 aaKnown RBP6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Fgf8P37237 268 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 St6galnac2P70277 373 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Nkpd1Q0VF94 599 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 UevldQ3U1V6 471 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Znf664Q4VA44 261 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Q6PIU9 354 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Upk3bQ80YF6 275 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tox4Q8BU11 619 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Q8CF25 301 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Sgms2Q9D4B1 365 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Syt13Q9EQT6 426 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Cst10Q9JM84 148 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Mlf1Q9QWV4 267 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Eif3iQ9QZD9 325 aaKnown RBP6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tln1P26039 2541 aaKnown RBP6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm19410A0A140LJC7 2098 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Itpr1P11881 2749 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm42543A0A0G2JET4 117 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm4175D3YTW8 314 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Vmn1r160E9Q346 307 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Vmn1r114L7N226 321 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Vmn1r123L7N270 307 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Vmn1r126L7N2C8 321 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Saa1P05366 122 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Cxcl1P12850 96 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Rpl29P47915 160 aaKnown RBP6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 SeboxP70368 190 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm6760Q0ZNK3 87 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Apobec4Q497M3 374 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Slc25a35Q5SWT3 300 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Rps19bp1Q8C6B9 143 aaKnown RBP6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Atg12Q9CQY1 141 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tmem54Q9D7S1 219 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Mdp1Q9D967 164 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tmem239Q9DA47 151 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Nova1Q9JKN6 507 aaKnown RBP6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Rnd2Q9QYM5 227 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Lhx2Q9Z0S2 406 aa6.11□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm42420A0A0J9YUQ2 99 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 A0A1L1SR50 188 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 4930444P10RikD3YUR1 185 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 DdtO35215 118 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Pax1P09084 446 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 UbdP63072 162 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Tle3Q08122 772 aaKnown RBP6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm6899Q3USS0 134 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 SspnQ62147 216 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr921Q7TRC0 313 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Map6Q7TSJ2 906 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Zfp729bQ80VN4 1045 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Rbpms2Q8VC52 206 aaKnown RBP6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr113Q8VEU4 312 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr1420Q8VF55 309 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Wasf3Q8VHI6 501 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Bcdin3dQ91YP1 285 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Zfp958Q99LG7 467 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Rtl8cQ9D6I0 112 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Frem1Q684R7 2191 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 NacaP70670 2187 aaKnown RBP6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 A0A1Y7VIT9 351 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Trav12-1A0N8R1 115 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Slc25a53A2AF28 346 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gm21616B6ZB74 166 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 IfnabL7MTU6 190 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 P18528 98 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Gdf1P20863 357 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Mas1P30554 324 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Ccr2P51683 373 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Htr2bQ02152 479 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr1507Q0VEP0 313 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Zglp1Q1WG82 266 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Trav5d-4Q5R1F6 114 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Olfr141Q60880 325 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 SnrpcQ62241 159 aa6.1□□□□□ -1.43
Clrn1-202ENSMUST00000055636 Foxb1Q64732 325 aa6.1□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms