RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Sssca1P56873 199 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr904Q7TRC9 310 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Lurap1Q9D6I9 239 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Cldn13Q9Z0S4 211 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Crybb2P62696 205 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Pxmp4Q9JJW0 212 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Kcne4Q9WTW3 170 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 NgfrQ9Z0W1 417 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ankrd33bQ3U0L2 486 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Fam109bQ14B98 259 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr1368Q8VFG3 314 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Srsf9Q9D0B0 222 aaKnown RBP14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Sh2d2aQ9QXK9 374 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ly75Q60767 1723 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm45753A0A1C7CYU8 86 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Dirc2Q8BFQ6 478 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tceal5Q8CCT4 200 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 VitQ8VHI5 650 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 PrnA0A075B668 197 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Rtp2Q80ZI2 223 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 C030005K15RikQ8BQN9 115 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Psg16Q8K0U8 395 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Cisd1Q91WS0 108 aaKnown RBP14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gp2Q9D733 531 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 PrndQ9QUG3 179 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 BlnkQ9QUN3 457 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Timp1P12032 205 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Wnt3P17553 355 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Cd7P50283 210 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Hmga2P52927 108 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Bglap3P54615 95 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tmem251Q8BH26 163 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr1330Q8VEY6 315 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 1700020A23RikQ9DA59 131 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Zswim8Q3UHH1 1832 aaKnown RBP14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r167G3UW71 315 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Fdx2Q9CPW2 174 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Pam16Q9CQV1 125 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 HikeshiQ9DD02 197 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Lnp1A0A1B0GSK3 178 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Cypt3B1AY64 174 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 P2rx4Q9JJX6 388 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm13083A2AGW5 501 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Mgst2A2RST1 147 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tnfaip6O08859 275 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Arg1Q61176 323 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Rbm14Q8C2Q3 669 aaKnown RBP14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Flywch2Q9CQE9 139 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tmem88Q9D0N8 159 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ppp1r27Q9D119 154 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Prss37Q9DAA4 237 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm5108J3QP01 101 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Klf9O35739 244 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr332Q5NC45 344 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Plxdc1Q91ZV7 500 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tmem186Q9CR76 216 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gng10Q9CXP8 68 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 FetubQ9QXC1 388 aa14.62□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Adgrg5Q3V3Z3 524 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Mfsd4b1Q8VCV9 425 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 GpnmbQ99P91 574 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ighv6-6A0A075B5T3 119 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Dmrta1Q8CFG4 490 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Prg4Q9JM99 1054 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Nubp1Q9R060 320 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr978E9Q985 311 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm5916G5E8W5 102 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Scgb2a2J3KMP9 96 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Zfp92Q62396 488 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Lims2Q91XD2 341 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Chst1Q9EQC0 411 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Psg19Q4KL31 475 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Fam162bQ9CX19 157 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Sfrp5Q9WU66 314 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm9857F7CXR1 130 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Siva1O54926 175 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Mmp9P41245 730 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Defa9P50707 93 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 G430049J08RikQ3TL09 166 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr823Q7TRH2 315 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr1243Q8VGM7 305 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r194J3JS27 296 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Nkain2Q4PNJ2 208 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Mef2aQ60929 498 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Zfp933Q6PEE4 468 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Prelid3aQ8VE85 172 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ufc1Q9CR09 167 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Omt2bD3YX29 119 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tctn2Q2MV57 700 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Q3U1D9 316 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tmem255aQ8BHW5 351 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr1228Q8VGM9 323 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Dppa2Q9CWH0 301 aa14.61□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Spatc1Q148B6 480 aa14.6□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 RetnlaQ9EP95 111 aa14.6□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Prr14lE9Q7C4 1971 aa14.6□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Brs3O54798 399 aa14.6□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Znf629Q6A085 867 aa14.6□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ptp4a1Q63739 173 aa14.6□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr1333Q7TQV7 317 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms