RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm20696H3BJN7 74 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ppp1ccP63087 323 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Fcrl1Q8R4Y0 343 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Rasl11bQ922H7 247 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Fbxo24Q9D417 589 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ptp4a3Q9D658 173 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Lhx9Q9WUH2 397 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ighv9-4A0A0A6YWH6 117 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 A630023A22RikJ3QP60 199 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm20939L7N243 523 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Psmg4P0C7N9 123 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Shc1P98083 579 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Spatc1Q148B6 480 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Trav5d-4Q5R1F6 114 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 OacylQ8BML2 685 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr1002Q8VFK2 318 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Abhd17aQ99JW1 310 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Srsf9Q9D0B0 222 aaKnown RBP8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Siglec1Q62230 1695 aa8.04□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Trav23A0A0G2JG17 115 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr1029A2ATE0 324 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm5426J3QNM7 103 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Hist1h2baP70696 127 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr1028Q7TR89 324 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Dusp28Q8BTR5 163 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Rbm14Q8C2Q3 669 aaKnown RBP8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 TskuQ8CBR6 354 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 CrhQ8CIT0 187 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Mbnl1Q9JKP5 341 aaKnown RBP8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ighv1-13A0A075B5I0 98 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm28729A0A1B0GSW2 409 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Samt3A2ARK7 233 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr191L7N1Z8 309 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 P01648 108 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 BsgP18572 389 aaKnown RBP8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Defa6P50704 93 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Pdlim4P70271 330 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm5150Q1AN92 299 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Xaf1Q5NBU8 273 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Taar4Q5QD15 347 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Mtch2Q791V5 303 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr1333Q7TQV7 317 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 UmodQ91X17 642 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Dph7Q9CYU6 477 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 ApooQ9DCZ4 198 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr926Q9EQ98 308 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Fbxl17Q9QZN1 701 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Kif13bA0A286YCV9 1847 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Sipa1l1Q8C0T5 1782 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ighv14-3A0A075B5R9 117 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm14124A2AU83 715 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 LexmA2AVQ5 414 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Cisd3B1AR13 137 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm15440D3Z3P4 90 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Slc18b1D3Z5L6 459 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm14408E9Q6B9 136 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Zfp108E9Q8I5 642 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Defa35E9QLQ1 93 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Foxd2O35392 492 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Hoxb1P17919 297 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gdf9Q07105 441 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Prss45Q8K4I7 317 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Flywch2Q9CQE9 139 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ap5s1Q9D742 170 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Akip1Q9JJR5 212 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Wnt16Q9QYS1 364 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Zfp972A2AW65 139 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Defa13P50711 93 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Zfp92Q62396 488 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr494Q8VG07 314 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Mrpl20Q9CQL4 149 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Cox20Q9D7J4 117 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 NpffQ9WVA8 114 aa8.03□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm45783A0A1B0GT48 74 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm12886B1AZM5 119 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Cd74P04441 279 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Pcp2P12660 120 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 St3gal2Q11204 350 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Ltbp3Q61810 1268 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Higd1cQ76I25 96 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 B430218F22RikQ8BQR5 223 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr873Q8VFJ0 319 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Olfr954Q9EQB6 314 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Myh13B1AR69 1938 aa8.02□□□□□ -1.12
Ccdc47-201ENSMUST00000002043 Gm14409A2ARR8 349 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr178E9Q9T3 319 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 G530012D18RikJ3QK25 139 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 S100a4P07091 101 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dbx1P52950 335 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dtx1Q61010 627 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Lrp11Q8CB67 483 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Slc25a45Q8CFJ7 288 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr279Q8VFD8 310 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr101Q920Z0 308 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Slc25a2Q99ML6 265 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 GpnmbQ99P91 574 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Vkorc1Q9CRC0 161 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ighv1-42A0A0A6YY38 117 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Defa37K9J724 93 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Fcn2O70497 314 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms