RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MOB3BQ86TA1 216 aa13.83□□□□□ -0.2
PHGDH-234ENST00000642041 TMEM217Q8N7C4 229 aa13.83□□□□□ -0.2
PHGDH-234ENST00000642041 Q8N7P7 452 aa13.83□□□□□ -0.2
PHGDH-234ENST00000642041 OR2G3Q8NGZ4 309 aa13.83□□□□□ -0.2
PHGDH-234ENST00000642041 MMP26Q9NRE1 261 aa13.83□□□□□ -0.2
PHGDH-234ENST00000642041 ODF3BA8MYP8 253 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 PRH1P02810 166 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 SAA1P0DJI8 122 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-234ENST00000642041 BRS3P32247 399 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 SNCAP37840 140 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 OR1L6Q8NGR2 347 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 CACNG8Q8WXS5 425 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 C1RLQ9NZP8 487 aa13.82□□□□□ -0.2
PHGDH-234ENST00000642041 CORTO00230 105 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 FBXO24O75426 580 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 TOX4O94842 621 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 IGKV1-16P04430 117 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 ATP6V0CP27449 155 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 CAMLGP49069 296 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 PAX2Q02962 417 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 C2orf83Q53S99 150 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 ETV3LQ6ZN32 361 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 THNSL2Q86YJ6 484 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 SLC24A4Q8NFF2 622 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 LYPD6BQ8NI32 183 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 PBDC1Q9BVG4 233 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 WDR61Q9GZS3 305 aaKnown RBP13.81□□□□□ -0.2
PHGDH-234ENST00000642041 SIRPDQ9H106 197 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 KIAA1456Q9P272 454 aa13.81□□□□□ -0.2
PHGDH-234ENST00000642041 MFSD2BA6NFX1 497 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 B4DSR2 109 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 SNRNP70P08621 437 aaKnown RBP13.8□□□□□ -0.2
PHGDH-234ENST00000642041 NPY1RP25929 384 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 TAGLN2P37802 199 aaKnown RBP13.8□□□□□ -0.2
PHGDH-234ENST00000642041 LINC00205P59089 165 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 BPIFB3P59826 476 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 ETFRF1Q6IPR1 90 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 HSD17B11Q8NBQ5 300 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 OR2T10Q8NGZ9 312 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
PHGDH-234ENST00000642041 TAF15Q92804 592 aaKnown RBP eCLIP13.8□□□□□ -0.2
PHGDH-234ENST00000642041 CITED4Q96RK1 184 aa13.8□□□□□ -0.2
PHGDH-234ENST00000642041 TEX50A0A1B0GTY4 177 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 H3BP45 60 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 CYB5BO43169 146 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 NXPH3O95157 252 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 IFNA4P05014 189 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 COX7A1P24310 79 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 GPX4P36969 197 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-234ENST00000642041 PJVKQ0ZLH3 352 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 VMO1Q7Z5L0 202 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 RBMXL1Q96E39 390 aaKnown RBP13.79□□□□□ -0.2
PHGDH-234ENST00000642041 NDUFA4L2Q9NRX3 87 aa13.79□□□□□ -0.2
PHGDH-234ENST00000642041 SRRM4A7MD48 611 aaKnown RBP13.78□□□□□ -0.2
PHGDH-234ENST00000642041 PMS2P5A8MQ11 134 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 TSPAN15O95858 294 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 MOSP00540 346 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 PAX8Q06710 450 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 TMEM267Q0VDI3 215 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-234ENST00000642041 AANATQ16613 207 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 FBLN7Q53RD9 439 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 OR8G2PQ6IF36 304 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 VKORC1L1Q8N0U8 176 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 OR4C12Q96R67 309 aa13.78□□□□□ -0.2
PHGDH-234ENST00000642041 TRAV1-1A0A0B4J248 108 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 TRAV20A0A0B4J274 112 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 C15orf62A8K5M9 175 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 NDUFS6O75380 124 aaKnown RBP13.77□□□□□ -0.21
PHGDH-234ENST00000642041 IGLV2-23P01705 113 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 REG1BP48304 166 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 LCN2P80188 198 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 EBI3Q14213 229 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 FAM74A1Q5RGS3 127 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 UTF1Q5T230 341 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 PPP1R27Q86WC6 154 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 TEX29Q8N6K0 151 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 NPBQ8NG41 125 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 ZDHHC16Q969W1 377 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 ESM1Q9NQ30 184 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.21
PHGDH-234ENST00000642041 A0A1B0GW64 132 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 A0A1W2PPI3 338 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 ANKRD34BA5PLL1 514 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 ZFP36P26651 326 aaKnown RBP13.76□□□□□ -0.21
PHGDH-234ENST00000642041 PMS2P11Q13670 270 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 PEA15Q15121 130 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 PRSS8Q16651 343 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 BSXQ3C1V8 233 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 BTNL8Q6UX41 500 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 Q6ZRG5 221 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 WDR83OSQ9Y284 106 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
PHGDH-234ENST00000642041 I3L521 148 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 J3QLI3 93 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 CRYGBP07316 175 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 H2AFB1P0C5Y9 115 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms