RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ONECUT1Q9UBC0 465 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 AKAP6Q13023 2319 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 GGCTO75223 188 aaKnown RBP3.74□□□□□ -1.81
SCN1A-210ENST00000635776 IGLV2-14P01704 120 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 DEFA6Q01524 100 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TFF3Q07654 80 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 MMDQ15546 238 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 BPIFA4PQ86YQ2 179 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 C11orf52Q96A22 123 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 A0A1B0GW15 77 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM200BQ69YZ2 307 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 BAGE3Q86Y29 109 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 BAGE2Q86Y30 109 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 SGMS2Q8NHU3 365 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 LOC105371242A0A075B767 164 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 BMI1P35226 326 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 DAZAP2Q15038 168 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 MOSP00540 346 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 ARL16Q0P5N6 197 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 PRSS8Q16651 343 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF672Q499Z4 452 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SPINK9Q5DT21 86 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SFRP2Q96HF1 295 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 WFIKKN1Q96NZ8 548 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 A0A1W2PPE3 182 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 MED19A0JLT2 244 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 ZNHIT1O43257 154 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SPINK2P20155 84 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 ZGRF1Q86YA3 2104 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 OR5AU1Q8NGC0 362 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 TRGV9Q99603 122 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 GNG7O60262 68 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 MFAP4P55083 255 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 PAX2Q02962 417 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 MISP3Q96FF7 219 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SLC25A17O43808 307 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SLC25A5P05141 298 aaKnown RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 PPP1R27Q86WC6 154 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM183AQ8IXX5 376 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 IL36BQ9NZH7 164 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 LSM4Q9Y4Z0 139 aaKnown RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 PMS2P5A8MQ11 134 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 IGHV2-70P01814 119 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 MGST1P10620 155 aaKnown RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 PSG9Q00887 426 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SRSF6Q13247 344 aaKnown RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 LBHQ53QV2 105 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 Q6AWC8 147 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 OR4B1Q8NGF8 309 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 OR2T6Q8NHC8 308 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM170AQ8WVE7 144 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 NDUFA4L2Q9NRX3 87 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 A8MWL6 223 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 COX7A1P24310 79 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 HABP2Q14520 560 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 HAPLN4Q86UW8 402 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 RRHO14718 337 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 CRISP2P16562 243 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 RPL7P18124 248 aaKnown RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 LYPD1Q8N2G4 141 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 PYGO2Q9BRQ0 406 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 SSBP3Q9BWW4 388 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-210ENST00000635776 ADAMTS20P59510 1910 aa3.73□□□□□ -1.81
SCN1A-210ENST00000635776 FCN1O00602 326 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 RNASE2P10153 161 aaKnown RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 IGFBP2P18065 325 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 GNB1P62873 340 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 SUMO1P63165 101 aaKnown RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PRR20EP86478 221 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PRR20CP86479 221 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PRR20DP86480 221 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PRR20BP86481 221 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PRR20AP86496 221 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 GPR179Q6PRD1 2367 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 KLHDC1Q8N7A1 406 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF114Q8NC26 417 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 NOL4LQ96MY1 436 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 SLC25A33Q9BSK2 321 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 TBL2Q9Y4P3 447 aaKnown RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 DMRT1Q9Y5R6 373 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 IGHV2-26A0A0B4J1V2 119 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF705GA8MUZ8 300 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 ISLRO14498 428 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 NBR2O15453 112 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 IBA57Q5T440 356 aaKnown RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 NPIPB3Q92617 1050 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 GRAMD2BQ96HH9 432 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 GPR82Q96P67 336 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PMCHP20382 165 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 FMC1Q96HJ9 113 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PACRGQ96M98 296 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 CDC42EP3Q9UKI2 254 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 CACNA1BQ00975 2339 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 TRGC2P03986 189 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PRTN3P24158 256 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 EFNA4P52798 201 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 RPS20P60866 119 aaKnown RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 ARL6IP6Q8N6S5 226 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 VSIRQ9H7M9 311 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 LOXP28300 417 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms