RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 PLEKHA3Q9HB20 300 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 IGLV11-55A0A075B6I3 123 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 A0A087WW49 117 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 LINC01619G3V211 115 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 TCRBP04435 133 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 HSPB1P04792 205 aaKnown RBP11.96□□□□□ -0.49
CLN6-211ENST00000635754 EXOSC2Q13868 293 aaKnown RBP11.96□□□□□ -0.49
CLN6-211ENST00000635754 KLK9Q2XQG4 91 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 ANKRD55Q3KP44 614 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 ZNF343Q6P1L6 599 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 Q6ZRM9 215 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 LYZL2Q7Z4W2 148 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 LRTM2Q8N967 370 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 RANGRFQ9HD47 186 aaPredicted RBP11.96□□□□□ -0.49
CLN6-211ENST00000635754 THYN1Q9P016 225 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 KLK9Q9UKQ9 250 aa11.96□□□□□ -0.49
CLN6-211ENST00000635754 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.49
CLN6-211ENST00000635754 FAM240BA0A1B0GVZ2 78 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 C9orf170A2RU37 121 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 OR4E1P0C645 316 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 ANXA7P20073 488 aaKnown RBP11.95□□□□□ -0.5
CLN6-211ENST00000635754 HOXA1P49639 335 aaPredicted RBP11.95□□□□□ -0.5
CLN6-211ENST00000635754 ERHP84090 104 aaKnown RBP11.95□□□□□ -0.5
CLN6-211ENST00000635754 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 SPINK9Q5DT21 86 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 FAM209BQ5JX69 171 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 OR1L6Q8NGR2 347 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
CLN6-211ENST00000635754 ENY2Q9NPA8 101 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 CACFD1Q9UGQ2 172 aa11.95□□□□□ -0.5
CLN6-211ENST00000635754 ANKRD34BA5PLL1 514 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
CLN6-211ENST00000635754 SPCS3P61009 180 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 DHRS2Q13268 280 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 SLC25A24Q6NUK1 477 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 LYG2Q86SG7 212 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 MCRIP2Q9BUT9 160 aaKnown RBP11.94□□□□□ -0.5
CLN6-211ENST00000635754 NUDT15Q9NV35 164 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
CLN6-211ENST00000635754 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 NDUFB8O95169 186 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 ZP3P21754 424 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 IFITM3Q01628 133 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 OR1P1Q8NH06 330 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 OR52E5Q8NH55 327 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 COQ8AQ8NI60 647 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 ENKURQ8TC29 256 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 EEF1AKMT3Q96AZ1 226 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 CXorf58Q96LI9 332 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 TMED3Q9Y3Q3 217 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
CLN6-211ENST00000635754 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
CLN6-211ENST00000635754 A0A1B0GU03 582 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 INS-IGF2F8WCM5 200 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 IGLL1P15814 213 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 SNCAP37840 140 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 SLURP1P55000 103 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 DEFA1P59665 94 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 DEFA3P59666 94 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 GPR61Q9BZJ8 451 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 NOTCH1P46531 2555 aa11.93□□□□□ -0.5
CLN6-211ENST00000635754 NOTCH3Q9UM47 2321 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 TRBV7-1A0A0A6YYK4 115 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 G3V4G9 280 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 HOXB5P09067 269 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 HOXD3P31249 432 aaPredicted RBP11.92□□□□□ -0.5
CLN6-211ENST00000635754 MFAP2P55001 183 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 PDLIM3Q53GG5 364 aaPredicted RBP11.92□□□□□ -0.5
CLN6-211ENST00000635754 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 SAMD5Q5TGI4 173 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 OR1S1Q8NH92 325 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 DCUN1D4Q92564 292 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 S4R3C0 116 aa11.92□□□□□ -0.5
CLN6-211ENST00000635754 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 OVOL1O14753 267 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 NXPH3O95157 252 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 IGHV3-23P01764 117 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 SLC25A6P12236 298 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 SUB1P53999 127 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLN6-211ENST00000635754 TNFRSF9Q07011 255 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 RPEL1Q2QD12 228 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 VN1R17PQ8TDU5 208 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 DLX4Q92988 240 aaPredicted RBP11.91□□□□□ -0.5
CLN6-211ENST00000635754 MISP3Q96FF7 219 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms