RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 NDUFB8O95169 186 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 TRBV12-3P01733 135 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 HSPE1P61604 102 aaKnown RBP11.91□□□□□ -0.5
LINC00339-209ENST00000635450 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 TRIQKQ629K1 86 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 SLC25A24Q6NUK1 477 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 PDCD10Q9BUL8 212 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
LINC00339-209ENST00000635450 DBX1A6NMT0 343 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 IGKV1-5P01602 117 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 SPNP16150 400 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 WT1-ASQ06250 92 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 DCTN2Q13561 401 aaKnown RBP11.9□□□□□ -0.5
LINC00339-209ENST00000635450 KLF5Q13887 457 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-209ENST00000635450 OR1L6Q8NGR2 347 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 WWC2-AS2Q96NR7 200 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 U3KQK5 164 aa11.9□□□□□ -0.5
LINC00339-209ENST00000635450 DNAH7Q8WXX0 4024 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 CDS2O95674 445 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 IGHV3-23P01764 117 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 AKR1C4P17516 323 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 ERHP84090 104 aaKnown RBP11.89□□□□□ -0.51
LINC00339-209ENST00000635450 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 RBPMSQ93062 196 aaKnown RBP11.89□□□□□ -0.51
LINC00339-209ENST00000635450 PLEKHA3Q9HB20 300 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 PEMTQ9UBM1 199 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
LINC00339-209ENST00000635450 S4R3C0 116 aa11.89□□□□□ -0.51
LINC00339-209ENST00000635450 PPP5D1E7EU14 171 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 BMPR1BO00238 502 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 GGCTO75223 188 aaKnown RBP11.88□□□□□ -0.51
LINC00339-209ENST00000635450 IFNA17P01571 189 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 ANXA3P12429 323 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 ARL3P36405 182 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 TMEM268Q5VZI3 342 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 SLC35G3Q8N808 338 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 GALNT14Q96FL9 552 aa11.88□□□□□ -0.51
LINC00339-209ENST00000635450 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 P0C879 139 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 TMED4Q7Z7H5 227 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 SELENOHQ8IZQ5 122 aaKnown RBP11.87□□□□□ -0.51
LINC00339-209ENST00000635450 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 VN1R17PQ8TDU5 208 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 TMEM230Q96A57 120 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 CCDC140Q96MF4 163 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
LINC00339-209ENST00000635450 ENY2Q9NPA8 101 aa11.87□□□□□ -0.51
LINC00339-209ENST00000635450 A0A0B4J293 547 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 PIGBOS1A0A0B4J2F0 54 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 NAP1L6A6NFF2 107 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 CENPXA8MT69 81 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 ST8SIA3O43173 380 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 GP9P14770 177 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 SRPXP78539 464 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 TMEM187Q14656 261 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 BAK1Q16611 211 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 SBSPONQ8IVN8 264 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 LHFPL5Q8TAF8 219 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 IL22RA2Q969J5 263 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-209ENST00000635450 DMRT1Q9Y5R6 373 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 SMAD5-AS1Q9Y6J3 95 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 TMEM56-RWDD3S4R434 201 aa11.86□□□□□ -0.51
LINC00339-209ENST00000635450 DYNC2H1Q8NCM8 4307 aaKnown RBP11.85□□□□□ -0.51
LINC00339-209ENST00000635450 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 OR2C1O95371 312 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 CLEC3BP05452 202 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 GPR183P32249 361 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 SNCAP37840 140 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-209ENST00000635450 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
LINC00339-209ENST00000635450 FAM106AQ4KMX7 169 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 TMEM128Q5BJH2 165 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 SPINK9Q5DT21 86 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 PLET1Q6UQ28 207 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 ZNF502Q8TBZ5 544 aa11.85□□□□□ -0.51
LINC00339-209ENST00000635450 LINC00854A0A1B0GVQ3 168 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 HLA-AP01891 365 aaKnown RBP11.84□□□□□ -0.51
LINC00339-209ENST00000635450 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-209ENST00000635450 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00339-209ENST00000635450 MFAP2P55001 183 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 GPHB5Q86YW7 130 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 LGI3Q8N145 548 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 ZNF114Q8NC26 417 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 CACFD1Q9UGQ2 172 aa11.84□□□□□ -0.51
LINC00339-209ENST00000635450 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 TGOLN2O43493 480 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms