RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SHPKQ9UHJ6 478 aa11.38□□□□□ -0.59
CDC42BPB-209ENST00000634889 FBXL7Q9UJT9 491 aa11.38□□□□□ -0.59
CDC42BPB-209ENST00000634889 CMYA5Q8N3K9 4069 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 A0A0G2JRQ6 117 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 DUXBA0A1W2PPF3 345 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 INS-IGF2F8WCM5 200 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 ZP3P21754 424 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 VAMP1P23763 118 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 C19orf35Q6ZS72 473 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 LRTM2Q8N967 370 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 ZNF114Q8NC26 417 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 CXorf58Q96LI9 332 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 PLEKHA3Q9HB20 300 aa11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 PEF1Q9UBV8 284 aaKnown RBP11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 F11RQ9Y624 299 aaKnown RBP11.37□□□□□ -0.59
CDC42BPB-209ENST00000634889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 SFT2D2O95562 160 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 IFNA17P01571 189 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 PPP1R1AQ13522 171 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 PDLIM3Q53GG5 364 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 NMSQ5H8A3 153 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 Q6ZRM9 215 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 OR2C3Q8N628 320 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 OR52E5Q8NH55 327 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 GPR146Q96CH1 333 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 PRR13Q9NZ81 148 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 CACNG5Q9UF02 275 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 DMRT1Q9Y5R6 373 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 MEGF8Q7Z7M0 2845 aa11.36□□□□□ -0.59
CDC42BPB-209ENST00000634889 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 ANKRD34BA5PLL1 514 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 OVOL1O14753 267 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 WIPF1O43516 503 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 UPK1BO75841 260 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 NDUFB8O95169 186 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 SLURP1P55000 103 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 ERHP84090 104 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 BEAN1Q3B7T3 259 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 DCUN1D4Q92564 292 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 DLX4Q92988 240 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 EEF1AKMT3Q96AZ1 226 aa11.35□□□□□ -0.59
CDC42BPB-209ENST00000634889 HLA-AP01891 365 aaKnown RBP11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 SULT1A3P0DMM9 295 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 SULT1A4P0DMN0 295 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 SPCS3P61009 180 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 ASAH1Q13510 395 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 C1QL4Q86Z23 238 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 FLVCR2Q9UPI3 526 aa11.34□□□□□ -0.59
CDC42BPB-209ENST00000634889 A0A1B0GU03 582 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 C9orf170A2RU37 121 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 TCRBP04435 133 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 OR4E1P0C645 316 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 HOXA1P49639 335 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 INSL3P51460 131 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 MFAP2P55001 183 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 KLF5Q13887 457 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 SMCO1Q147U7 214 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 RPEL1Q2QD12 228 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 SLC25A24Q6NUK1 477 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 MZT2BQ6NZ67 158 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 ENY2Q9NPA8 101 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 TBC1D24Q9ULP9 559 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
CDC42BPB-209ENST00000634889 MFSD2BA6NFX1 497 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 BMPR1BO00238 502 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 SLC25A6P12236 298 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 SNCAP37840 140 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 EGFEM1PQ0D2K5 195 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 DHRS2Q13268 280 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 SPINK9Q5DT21 86 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 LYG2Q86SG7 212 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 ZNF502Q8TBZ5 544 aa11.32□□□□□ -0.6
CDC42BPB-209ENST00000634889 GGCTO75223 188 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 ANXA7P20073 488 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 ARL3P36405 182 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 DEFA6Q01524 100 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 TATDN3Q17R31 274 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 C4orf46Q504U0 113 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 ACSM6Q6P461 480 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 COQ8AQ8NI60 647 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 NUDT15Q9NV35 164 aa11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 ZMAT5Q9UDW3 170 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-209ENST00000634889 FAM240BA0A1B0GVZ2 78 aa11.3□□□□□ -0.6
CDC42BPB-209ENST00000634889 K7EIM0 57 aa11.3□□□□□ -0.6
CDC42BPB-209ENST00000634889 CORTO00230 105 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms