RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 DBX1A6NMT0 343 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 CSN3P07498 182 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 ERHP84090 104 aaKnown RBP11.97□□□□□ -0.49
LINC00339-207ENST00000634712 DHODHQ02127 395 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 SPANXN2Q5MJ10 180 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 TOMM5Q8N4H5 51 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 VN1R17PQ8TDU5 208 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 C5orf66Q9H5L9 145 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 NAA60Q9H7X0 242 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 SLC2A8Q9NY64 477 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 SIGLEC8Q9NYZ4 499 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
LINC00339-207ENST00000634712 ZNF320A2RRD8 509 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 IFNA17P01571 189 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 IGKV1-5P01602 117 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 OR5AC1P0C628 307 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 UCP1P25874 307 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 PRCDQ00LT1 54 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 IZUMO4Q1ZYL8 232 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 PLET1Q6UQ28 207 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 IL34Q6ZMJ4 242 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 GPHB5Q86YW7 130 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 PLEKHA3Q9HB20 300 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 ZC4H2Q9NQZ6 224 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 DMRT1Q9Y5R6 373 aa11.96□□□□□ -0.49
LINC00339-207ENST00000634712 GPR183P32249 361 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 LCN12Q6JVE5 192 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 SLC35G3Q8N808 338 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 ZNF502Q8TBZ5 544 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 DYNLRB2Q8TF09 96 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 V9GYH0 126 aa11.95□□□□□ -0.5
LINC00339-207ENST00000634712 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 LGALS9O00182 355 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 CDS2O95674 445 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 CCDC190Q86UF4 302 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 GLYATL2Q8WU03 294 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 ENY2Q9NPA8 101 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
LINC00339-207ENST00000634712 A0A0B4J293 547 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 AKR1C4P17516 323 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 SNCAP37840 140 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 INPP1P49441 399 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 MFAP2P55001 183 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 KLF9Q13886 244 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-207ENST00000634712 SPINK9Q5DT21 86 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 FAM219AQ8IW50 185 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 UBAC2Q8NBM4 344 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 SCARB1Q8WTV0 552 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 RBPMSQ93062 196 aaKnown RBP11.93□□□□□ -0.5
LINC00339-207ENST00000634712 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
LINC00339-207ENST00000634712 OR2T8A6NH00 312 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 C2orf70A6NJV1 201 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 TGOLN2O43493 480 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 P0C879 139 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 ANXA3P12429 323 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 FOLR2P14207 255 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 SUB1P53999 127 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 ZNF79Q15937 498 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 Q56UQ5 140 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 TMEM268Q5VZI3 342 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 SELENOHQ8IZQ5 122 aaKnown RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 OR2K2Q8NGT1 345 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 BSCL2Q96G97 398 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 IGHV3-35A0A0C4DH35 117 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 ETV6P41212 452 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 HOXA1P49639 335 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 SPSB3Q6PJ21 355 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 DEDD2Q8WXF8 326 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 TRIM63Q969Q1 353 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
LINC00339-207ENST00000634712 TECRQ9NZ01 308 aaKnown RBP11.92□□□□□ -0.5
LINC00339-207ENST00000634712 K7EIM0 57 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 CBLN1P23435 193 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 MFAP4P55083 255 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 LHFPL5Q8TAF8 219 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 GALNT14Q96FL9 552 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 ASCL2Q99929 193 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 UFC1Q9Y3C8 167 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 TMEM56-RWDD3S4R434 201 aa11.91□□□□□ -0.5
LINC00339-207ENST00000634712 A0A0G2JRQ6 117 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 SPCS3P61009 180 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 TMEM187Q14656 261 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 DEFB114Q30KQ6 69 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms