RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 OR5T1Q8NG75 326 aa9.04□□□□□ -0.96
PTPN7-219ENST00000629151 OR10W1Q8NGF6 305 aa9.04□□□□□ -0.96
PTPN7-219ENST00000629151 DTD1Q8TEA8 209 aa9.04□□□□□ -0.96
PTPN7-219ENST00000629151 ZNF747Q9BV97 191 aa9.04□□□□□ -0.96
PTPN7-219ENST00000629151 ZNF355PQ9NSJ1 428 aa9.04□□□□□ -0.96
PTPN7-219ENST00000629151 LINC00527Q9UJ94 153 aa9.04□□□□□ -0.96
PTPN7-219ENST00000629151 F11RQ9Y624 299 aaKnown RBP9.04□□□□□ -0.96
PTPN7-219ENST00000629151 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 MPTX1A8MV57 137 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 CCSO14618 274 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 SCAF4O95104 1147 aaKnown RBP9.03□□□□□ -0.96
PTPN7-219ENST00000629151 PET100P0DJ07 73 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 PF4V1P10720 104 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 AREGP15514 252 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 CD83Q01151 205 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 IL15RAQ13261 267 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 SHISA2Q6UWI4 295 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 ZNF329Q86UD4 541 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 TAF15Q92804 592 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPN7-219ENST00000629151 SMIM8Q96KF7 97 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 UBE2E2Q96LR5 201 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 ATP6V0BQ99437 205 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 RBKSQ9H477 322 aa9.03□□□□□ -0.96
PTPN7-219ENST00000629151 JMJD1CQ15652 2540 aa9.02□□□□□ -0.96
PTPN7-219ENST00000629151 TRBV9A0A0B4J1U6 114 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 TCRBV4S1A1TA0A5B7 111 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 L7N2F9 121 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 SOX15O60248 233 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 TRGV3P03979 118 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 CDX1P47902 265 aaPredicted RBP9.02□□□□□ -0.97
PTPN7-219ENST00000629151 RAB11AP62491 216 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 RPL23AP62750 156 aaKnown RBP9.02□□□□□ -0.97
PTPN7-219ENST00000629151 VAMP2P63027 116 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 FGL1Q08830 312 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 BSXQ3C1V8 233 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 C2orf83Q53S99 150 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 SLC25A24Q6NUK1 477 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 SLC24A4Q8NFF2 622 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 RNASEH2CQ8TDP1 164 aaKnown RBP9.02□□□□□ -0.97
PTPN7-219ENST00000629151 CXorf58Q96LI9 332 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 P2RX4Q99571 388 aa9.02□□□□□ -0.97
PTPN7-219ENST00000629151 GAR1Q9NY12 217 aaKnown RBP9.02□□□□□ -0.97
PTPN7-219ENST00000629151 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
PTPN7-219ENST00000629151 IGLV11-55A0A075B6I3 123 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 RPS10-NUDT3A0A1W2PQS6 291 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 TSC22D2O75157 780 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 SCGB1D2O95969 90 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 IFNA10P01566 189 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 MBPP02686 304 aaPredicted RBP9.01□□□□□ -0.97
PTPN7-219ENST00000629151 GIPP09681 153 aaPredicted RBP9.01□□□□□ -0.97
PTPN7-219ENST00000629151 APELAP0DMC3 54 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 H2BFSP57053 126 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 TPPP2P59282 170 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 RAP2BP61225 183 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 POLR2GP62487 172 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPN7-219ENST00000629151 RHOGP84095 191 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 ATP5G2Q06055 141 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 EXOSC2Q13868 293 aaKnown RBP9.01□□□□□ -0.97
PTPN7-219ENST00000629151 FCN2Q15485 313 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 C2orf68Q2NKX9 166 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 NDUFA11Q86Y39 141 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 CITED1Q99966 193 aa9.01□□□□□ -0.97
PTPN7-219ENST00000629151 SVEP1Q4LDE5 3571 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 TRBV7-1A0A0A6YYK4 115 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 REG1AP05451 166 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 RNASE2P10153 161 aaKnown RBP9□□□□□ -0.97
PTPN7-219ENST00000629151 NPY1RP25929 384 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 SPINK9Q5DT21 86 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 ZNF491Q8N8L2 437 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 MS4A10Q96PG2 267 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 FANCD2OSQ96PS1 177 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 ZNF436Q9C0F3 470 aaPredicted RBP9□□□□□ -0.97
PTPN7-219ENST00000629151 MAGT1Q9H0U3 335 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 FBXL7Q9UJT9 491 aa9□□□□□ -0.97
PTPN7-219ENST00000629151 STRAPQ9Y3F4 350 aaKnown RBP9□□□□□ -0.97
PTPN7-219ENST00000629151 NIPBLQ6KC79 2804 aaeCLIP8.99□□□□□ -0.97
PTPN7-219ENST00000629151 E5RGE8 158 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 K7EPK0 472 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 SSSCA1O60232 199 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 SCGB2A1O75556 95 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 NXPH3O95157 252 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 SIX6O95475 246 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 IFNA4P05014 189 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 RPLP1P05386 114 aaKnown RBP8.99□□□□□ -0.97
PTPN7-219ENST00000629151 CD28P10747 220 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 SLC25A4P12235 298 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 CXCL3P19876 107 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 RUNX1Q01196 453 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 RAB32Q13637 225 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 TCTEX1D4Q5JR98 221 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 SPATA3Q8NHX4 192 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 PPP1R1CQ8WVI7 109 aa8.99□□□□□ -0.97
PTPN7-219ENST00000629151 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms