RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 IGLC1P0CG04 106 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 IFITM1P13164 125 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 PFN2P35080 140 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 DRD3P35462 400 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF93P35789 620 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 SNCAP37840 140 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 PTGDSP41222 190 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 RND2P52198 227 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 DIO3P55073 304 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 DAD1P61803 113 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 RPS24P62847 133 aaKnown RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 FABP5Q01469 135 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 AKR1C1Q04828 323 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 LOXL1Q08397 574 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 KLRD1Q13241 179 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 EIF3IQ13347 325 aaKnown RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 KIAA0040Q15053 153 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 TGIF1Q15583 401 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 VMA21Q3ZAQ7 101 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 FKBP1CQ5VVH2 108 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 NXNL2Q5VZ03 156 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 Q5XG85 94 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 PVRIGQ6DKI7 326 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 DNAJC24Q6P3W2 148 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 Q6ZN92 141 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM179BQ7Z7N9 219 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM183AQ8IXX5 376 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 FTMTQ8N4E7 242 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 RNF175Q8N4F7 328 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 ZFP41Q8N8Y5 198 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 ZDHHC22Q8N966 263 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 NUP35Q8NFH5 326 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 OR4B1Q8NGF8 309 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 OR5AK2Q8NH90 309 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 BORCS8Q96FH0 119 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 HIST1H2BLQ99880 126 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 SLC25A21Q9BQT8 299 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 THTPAQ9BU02 230 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 MRPL32Q9BYC8 188 aaKnown RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 DEFB126Q9BYW3 111 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 COMMD5Q9GZQ3 224 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 CA10Q9NS85 328 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 CCDC167Q9P0B6 97 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 UQCR10Q9UDW1 63 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 RIMS3Q9UJD0 308 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 RPUSD1Q9UJJ7 312 aaKnown RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 PXMP4Q9Y6I8 212 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 ITSN1Q15811 1721 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 LAMC1P11047 1609 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 CDK13Q14004 1512 aaKnown RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 TOPBP1Q92547 1522 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 ABCC2Q92887 1545 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 MYO18AQ92614 2054 aaKnown RBP2.16□□□□□ -2.06
CNOT1-223ENST00000628857 PTPRKQ15262 1439 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 TNS2Q63HR2 1409 aa2.16□□□□□ -2.06
CNOT1-223ENST00000628857 PPRC1Q5VV67 1664 aaKnown RBP2.15□□□□□ -2.06
CNOT1-223ENST00000628857 ITSN2Q9NZM3 1697 aa2.15□□□□□ -2.06
CNOT1-223ENST00000628857 RLFQ13129 1914 aa2.15□□□□□ -2.06
CNOT1-223ENST00000628857 PLEKHH2Q8IVE3 1493 aa2.15□□□□□ -2.06
CNOT1-223ENST00000628857 TRBV19A0A075B6N1 114 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 A0A087X0T9 212 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 TRAV4A0A0B4J268 109 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PLAC8L1A1L4L8 177 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 C8orf87E5RJ46 101 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 H3BQ15 152 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ISLRO14498 428 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 RER1O15258 196 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PDCD6O75340 191 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 LYZL6O75951 148 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 TNFP01375 233 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 EIF4EP06730 217 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 RBMY1CP0DJD4 496 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PPIBP23284 216 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 NFYBP25208 207 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PRSS3P35030 304 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 MYCNOSP40205 109 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF83P51522 516 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 CCL23P55773 120 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 CACNG7P62955 275 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PLGLB1Q02325 96 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF85Q03923 595 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 DAZ2Q13117 558 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 FAM219BQ5XKK7 198 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 AMMECR1LQ6DCA0 310 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 MRPL54Q6P161 138 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 Q6Q795 121 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 UNQ5815/PRO19632Q6UWF5 114 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 DAZ4Q86SG3 579 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF429Q86V71 674 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ZCCHC24Q8N2G6 241 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 LINC00471Q8N535 108 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 KCNRGQ8N5I3 272 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 DCAF4L2Q8NA75 395 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 LY6G5BQ8NDX9 201 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 OR4C16Q8NGL9 310 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 SLC25A40Q8TBP6 338 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 RTN4IP1Q8WWV3 396 aaPredicted RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 SLC25A38Q96DW6 304 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms