RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 LPCAT3Q6P1A2 487 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 Q6ZWC4 215 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 LYSMD2Q8IV50 215 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 GPX8Q8TED1 209 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 SCARB1Q8WTV0 552 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 SLC25A46Q96AG3 418 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 TMEM56Q96MV1 263 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 CMTM3Q96MX0 182 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 TMEM14BQ9NUH8 114 aa9.27□□□□□ -0.93
SOX2-OT-247ENST00000628347 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 KIR2DL5BA0A0G2JN68 375 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 KIR2DL5BA0A0G2JPC4 375 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 UBE2CO00762 179 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 FCGR2BP31994 310 aaPredicted RBP9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 ADMP35318 185 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 HRH1P35367 487 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 G6PCP35575 357 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 APOC4P55056 127 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 KIR2DL5AQ8N109 375 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 TSPAN14Q8NG11 270 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 OR1P1Q8NH06 330 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 HINT2Q9BX68 163 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 SCPEP1Q9HB40 452 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 VCX3AQ9NNX9 186 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 NSG2Q9Y328 171 aa9.26□□□□□ -0.93
SOX2-OT-247ENST00000628347 A0A087WXM4 84 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 OR4C46A6NHA9 309 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 C15orf62A8K5M9 175 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 APOA1P02647 267 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 EIF4EP06730 217 aaKnown RBP9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 ATF4P18848 351 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 S100GP29377 79 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 UCP3P55916 312 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 LSM3P62310 102 aaKnown RBP9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 TNFRSF9Q07011 255 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 ODF3L2Q3SX64 289 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 ZNF414Q96IQ9 312 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 SEC22AQ96IW7 307 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
SOX2-OT-247ENST00000628347 IGHV3-21A0A0B4J1V1 117 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 DBX1A6NMT0 343 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 CTSGP08311 255 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 HLA-DMAP28067 261 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 BMI1P35226 326 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 RELQ04864 619 aaPredicted RBP9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 PHLDA2Q53GA4 152 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 Q56UQ5 140 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 TBC1D26Q86UD7 250 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 TXN2Q99757 166 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 UBQLN2Q9UHD9 624 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 VPS13DQ5THJ4 4388 aa9.24□□□□□ -0.93
SOX2-OT-247ENST00000628347 I3L2K1 104 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 SPRY2O43597 315 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 TNFAIP8O95379 198 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 IGKV1-39P01597 117 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 IGKV1D-39P04432 117 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 CTSDP07339 412 aaPredicted RBP9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 RCVRNP35243 200 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 MFAP4P55083 255 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 TSPAN5P62079 268 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 PRCDQ00LT1 54 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 RNF183Q96D59 192 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 GALNT14Q96FL9 552 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 OR10C1Q96KK4 312 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 C20orf24Q9BUV8 137 aa9.23□□□□□ -0.93
SOX2-OT-247ENST00000628347 IGHV7-4-1A0A0J9YVY3 117 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 A0A0J9YWU9 116 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 SMIM31A0A1B0GVY4 71 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 NUPL2O15504 423 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 CMC4P56277 68 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 RND3P61587 244 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 HSPE1P61604 102 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 H2BFWTQ7Z2G1 175 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 LYG2Q86SG7 212 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 STPG3Q8N7X2 389 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 UBAC2Q8NBM4 344 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 OR4A16Q8NH70 328 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 COMMD3Q9UBI1 195 aa9.22□□□□□ -0.93
SOX2-OT-247ENST00000628347 NUPR2A6NF83 97 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 CHEK1O14757 476 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZNF207O43670 478 aaKnown RBP9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 MT-CO2P00403 227 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 NCS1P62166 190 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 EWSR1Q01844 656 aaKnown RBP eCLIP9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 SNX29P2Q8IUI4 249 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 TMEM116Q8NCL8 245 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 MISP3Q96FF7 219 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZNF486Q96H40 463 aaPredicted RBP9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 RNF2Q99496 336 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 NXF2Q9GZY0 626 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms