RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GAR1Q9NY12 217 aaKnown RBP16.97■□□□□ 0.31
SF1-220ENST00000626028 SCP2D1Q9UJQ7 156 aa16.97■□□□□ 0.31
SF1-220ENST00000626028 C2orf70A6NJV1 201 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 DBX1A6NMT0 343 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 INS-IGF2F8WCM5 200 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 IGHV3-23P01764 117 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 AKR1C2P52895 323 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 FAM219AQ8IW50 185 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 OR2C3Q8N628 320 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 BSCL2Q96G97 398 aaPredicted RBP16.96■□□□□ 0.31
SF1-220ENST00000626028 PALMDQ9NP74 551 aa16.96■□□□□ 0.31
SF1-220ENST00000626028 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 HLA-AP01891 365 aaKnown RBP16.95■□□□□ 0.3
SF1-220ENST00000626028 ELLP55199 621 aaPredicted RBP16.95■□□□□ 0.3
SF1-220ENST00000626028 ERHP84090 104 aaKnown RBP16.95■□□□□ 0.3
SF1-220ENST00000626028 TRIM16LQ309B1 348 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 PLET1Q6UQ28 207 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 GTSCR1Q86UQ5 136 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 HAPLN4Q86UW8 402 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 SGPP2Q8IWX5 399 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 Q8N1Y9 231 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 DEDD2Q8WXF8 326 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 MARC2Q969Z3 335 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 THAP7Q9BT49 309 aaPredicted RBP16.95■□□□□ 0.3
SF1-220ENST00000626028 TMEM222Q9H0R3 208 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 RBM38Q9H0Z9 239 aaKnown RBP16.95■□□□□ 0.3
SF1-220ENST00000626028 GPR132Q9UNW8 380 aa16.95■□□□□ 0.3
SF1-220ENST00000626028 CDS2O95674 445 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 IGKV1-5P01602 117 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 FOLR2P14207 255 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 GPR183P32249 361 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 S100A5P33763 92 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 DHODHQ02127 395 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 FAAP20Q6NZ36 180 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 DYNLRB2Q8TF09 96 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 RRNAD1Q96FB5 475 aaKnown RBP16.94■□□□□ 0.3
SF1-220ENST00000626028 RTBDNQ9BSG5 229 aaPredicted RBP16.94■□□□□ 0.3
SF1-220ENST00000626028 PLEKHA3Q9HB20 300 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 ZC4H2Q9NQZ6 224 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 S4R3C0 116 aa16.94■□□□□ 0.3
SF1-220ENST00000626028 CBLN1P23435 193 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 FAUP35544 74 aaKnown RBP16.93■□□□□ 0.3
SF1-220ENST00000626028 MFAP2P55001 183 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 AP3S2P59780 193 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 DEFB114Q30KQ6 69 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 C11orf87Q6NUJ2 197 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 ADAMTSL5Q6ZMM2 481 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 OR51S1Q8NGJ8 323 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 ZNF436Q9C0F3 470 aaPredicted RBP16.93■□□□□ 0.3
SF1-220ENST00000626028 C5orf66Q9H5L9 145 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 NAA60Q9H7X0 242 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 C21orf62Q9NYP8 219 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 CACFD1Q9UGQ2 172 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 U3KQK5 164 aa16.93■□□□□ 0.3
SF1-220ENST00000626028 TEX13DA0A0J9YY54 714 aaPredicted RBP16.92■□□□□ 0.3
SF1-220ENST00000626028 ZNF320A2RRD8 509 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 K7EIM0 57 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 TGOLN2O43493 480 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 FRMD6-AS1P0C7T7 363 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 FCGR2BP31994 310 aaPredicted RBP16.92■□□□□ 0.3
SF1-220ENST00000626028 SP6Q3SY56 376 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 CD300EQ496F6 205 aaPredicted RBP16.92■□□□□ 0.3
SF1-220ENST00000626028 SCARB1Q8WTV0 552 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 GLYATL2Q8WU03 294 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 TXN2Q99757 166 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 PDCD10Q9BUL8 212 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 UFC1Q9Y3C8 167 aa16.92■□□□□ 0.3
SF1-220ENST00000626028 A0A0B4J293 547 aa16.91■□□□□ 0.3
SF1-220ENST00000626028 PIGBOS1A0A0B4J2F0 54 aa16.91■□□□□ 0.3
SF1-220ENST00000626028 TMEM213A2RRL7 107 aa16.91■□□□□ 0.3
SF1-220ENST00000626028 CRYM-AS1A6NIL9 109 aa16.91■□□□□ 0.3
SF1-220ENST00000626028 AARDQ4LEZ3 155 aa16.91■□□□□ 0.3
SF1-220ENST00000626028 RBPMSQ93062 196 aaKnown RBP16.91■□□□□ 0.3
SF1-220ENST00000626028 C19orf73Q9NVV2 129 aa16.91■□□□□ 0.3
SF1-220ENST00000626028 OR5AC1P0C628 307 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 C8orf88P0DMB2 117 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 IGHV4-30-4P0DP06 118 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 GALNT14Q96FL9 552 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 WWC2-AS2Q96NR7 200 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 MRPL27Q9P0M9 148 aaKnown RBP16.9■□□□□ 0.3
SF1-220ENST00000626028 KCNIP3Q9Y2W7 256 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 STAB2Q8WWQ8 2551 aa16.9■□□□□ 0.3
SF1-220ENST00000626028 CORTO00230 105 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 ST8SIA3O43173 380 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 IFNA17P01571 189 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 SNCAP37840 140 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 SLC35G3Q8N808 338 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 OR52E5Q8NH55 327 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 RNASE11Q8TAA1 199 aaKnown RBP16.89■□□□□ 0.29
SF1-220ENST00000626028 TMEM190Q8WZ59 177 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 IL22RA2Q969J5 263 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 MCUBQ9NWR8 336 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 V9GYH0 126 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 TENM3Q9P273 2699 aa16.89■□□□□ 0.29
SF1-220ENST00000626028 IZUMO1RA6ND01 250 aa16.88■□□□□ 0.29
SF1-220ENST00000626028 OR2T8A6NH00 312 aa16.88■□□□□ 0.29
SF1-220ENST00000626028 I3L2K1 104 aa16.88■□□□□ 0.29
SF1-220ENST00000626028 NDUFA4O00483 81 aa16.88■□□□□ 0.29
SF1-220ENST00000626028 ETV6P41212 452 aa16.88■□□□□ 0.29
SF1-220ENST00000626028 SUB1P53999 127 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms