RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 C9orf152Q5JTZ5 239 aa14.11□□□□□ -0.15
PTCHD3-202ENST00000622555 ZNF471Q9BX82 626 aaPredicted RBP14.11□□□□□ -0.15
PTCHD3-202ENST00000622555 PSENENQ9NZ42 101 aa14.11□□□□□ -0.15
PTCHD3-202ENST00000622555 A0A1W2PN81 502 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 DNAJC9-AS1A6NH13 148 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 H3BP45 60 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 GPR137BO60478 399 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 CHRNA7P36544 502 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 VDAC2P45880 294 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 PAX9P55771 341 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 RPL23AP62750 156 aaKnown RBP14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 NDPQ00604 133 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 ZNF418Q8TF45 676 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 SMIM8Q96KF7 97 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 FAM103A1Q9BTL3 118 aaKnown RBP14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 WSB1Q9Y6I7 421 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 ANK3Q12955 4377 aaKnown RBP14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 APELAP0DMC3 54 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 HKR1P10072 659 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 NUP62P37198 522 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 P2RY1P47900 373 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 CAV2P51636 162 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 TAS2R30P59541 319 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 PARP11Q9NR21 331 aa14.1□□□□□ -0.15
PTCHD3-202ENST00000622555 FN1P02751 2386 aaKnown RBP14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 TEX22C9J3V5 150 aa14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 LY86O95711 162 aa14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 BLCAPP62952 87 aa14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 SPANXN5Q5MJ07 72 aa14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 MRPL41Q8IXM3 137 aaKnown RBP14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 CXorf58Q96LI9 332 aa14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 LYRM2Q9NU23 88 aaPredicted RBP14.09□□□□□ -0.15
PTCHD3-202ENST00000622555 IGLC7A0M8Q6 106 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 MFSD2BA6NFX1 497 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 FAM24AA6NFZ4 105 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 OR13C7P0DN81 318 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 ERHP84090 104 aaKnown RBP14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 WT1-ASQ06250 92 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 OR2C3Q8N628 320 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 ESM1Q9NQ30 184 aa14.08□□□□□ -0.16
PTCHD3-202ENST00000622555 TAAR5O14804 337 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 CRLF1O75462 422 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 IFNA10P01566 189 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 AREGP15514 252 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 ZC4H2Q9NQZ6 224 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 STRAPQ9Y3F4 350 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 FBXO7Q9Y3I1 522 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 MAST4O15021 2626 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 LINC01548A6NM66 108 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 INS-IGF2F8WCM5 200 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 ATP6V0E1O15342 81 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 REG1AP05451 166 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 TPT1P13693 172 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 RPL12P30050 165 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 SNCAP37840 140 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 RPP30P78346 268 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 TOR2AQ5JU69 321 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 HSD17B13Q7Z5P4 300 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 BAP18Q8IXM2 172 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 EIF4E3Q8N5X7 224 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 SLC24A4Q8NFF2 622 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 OR4C12Q96R67 309 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 SRSF8Q9BRL6 282 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 NPFFR1Q9GZQ6 430 aa14.07□□□□□ -0.16
PTCHD3-202ENST00000622555 IGSF23A1L1A6 192 aa14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 EGR2P11161 476 aaPredicted RBP14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 TMEM267Q0VDI3 215 aaPredicted RBP14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 SLC35E3Q7Z769 313 aa14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 TMEM252Q8N6L7 170 aa14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 SGMS2Q8NHU3 365 aa14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 SLC25A31Q9H0C2 315 aa14.06□□□□□ -0.16
PTCHD3-202ENST00000622555 CLDN34H7C241 214 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 TRIM77I1YAP6 450 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 IGHG2P01859 326 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 NPY1RP25929 384 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 HILS1P60008 231 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 ECSCRQ19T08 205 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 Q6ZS46 218 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 LFNGQ8NES3 379 aa14.05□□□□□ -0.16
PTCHD3-202ENST00000622555 C15orf62A8K5M9 175 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 METTL15P1P0C7V9 234 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 FAM74A1Q5RGS3 127 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 STX12Q86Y82 276 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 PRSS22Q9GZN4 317 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 PFDN2Q9UHV9 154 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 CST7O76096 145 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 OR8U8P0C7N1 319 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 RNASE2P10153 161 aaKnown RBP14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 EWSR1Q01844 656 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 ASPHD1Q5U4P2 390 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 UNQ5815/PRO19632Q6UWF5 114 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 TMEM14EPQ6UXP3 125 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 JMJD8Q96S16 334 aa14.04□□□□□ -0.16
PTCHD3-202ENST00000622555 SULT1A1P50225 295 aa14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 SUB1P53999 127 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 RAB11AP62491 216 aa14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 NHLH2Q02577 135 aa14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 BSXQ3C1V8 233 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms