RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 AKAP9Q99996 3911 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 PRSS46E5RG02 174 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 M0QZK8 103 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 HOXA3O43365 443 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-212ENST00000621783 SCAF4O95104 1147 aaKnown RBP8.43□□□□□ -1.06
CPNE3-212ENST00000621783 SNCAP37840 140 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 HBG1P69891 147 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 HBG2P69892 147 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 IFITM2Q01629 132 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 SLC38A11Q08AI6 406 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 RPL7L1Q6DKI1 246 aaKnown RBP8.43□□□□□ -1.06
CPNE3-212ENST00000621783 ETV3LQ6ZN32 361 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 HSD17B13Q7Z5P4 300 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-212ENST00000621783 SLC51BQ86UW2 128 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 LILRB2Q8N423 598 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 SIGLECL1Q8N7X8 197 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 ZNF114Q8NC26 417 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 ATP5SQ99766 215 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 GON7Q9BXV9 100 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 SLA2Q9H6Q3 261 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 PARP11Q9NR21 331 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 TNFRSF19Q9NS68 423 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 VPREB3Q9UKI3 123 aa8.43□□□□□ -1.06
CPNE3-212ENST00000621783 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 ATP6V0E1O15342 81 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 DFFBO76075 338 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 IFNA4P05014 189 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 EGR2P11161 476 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-212ENST00000621783 CD99P14209 185 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 ASPHD1Q5U4P2 390 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 C19orf35Q6ZS72 473 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 OR10P1Q8NGE3 313 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 STOML3Q8TAV4 291 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 ST8SIA2Q92186 375 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 PINX1Q96BK5 328 aaKnown RBP8.42□□□□□ -1.06
CPNE3-212ENST00000621783 P2RX4Q99571 388 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 TMEM147Q9BVK8 224 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 ABCA1O95477 2261 aa8.42□□□□□ -1.06
CPNE3-212ENST00000621783 BORCS7-ASMTA0A0B4J1R7 106 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 CFDP00746 253 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-212ENST00000621783 TPT1P13693 172 aaKnown RBP8.41□□□□□ -1.06
CPNE3-212ENST00000621783 FOSL1P15407 271 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 SUB1P53999 127 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPNE3-212ENST00000621783 MFAP2P55001 183 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-212ENST00000621783 ZNF266Q14584 549 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 C9orf152Q5JTZ5 239 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 SGMS2Q8NHU3 365 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
CPNE3-212ENST00000621783 ITPR2Q14571 2701 aa8.41□□□□□ -1.06
CPNE3-212ENST00000621783 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 NPIPB5A8MRT5 1133 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 JTBO76095 146 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 CTRB1P17538 263 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.06
CPNE3-212ENST00000621783 DLK1P80370 383 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 SCGB2A2Q13296 93 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 ECSCRQ19T08 205 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 VWC2Q2TAL6 325 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 TEX261Q6UWH6 196 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 UBAC2Q8NBM4 344 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 OR1P1Q8NH06 330 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
CPNE3-212ENST00000621783 ARV1Q9H2C2 271 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 DMRT1Q9Y5R6 373 aa8.4□□□□□ -1.06
CPNE3-212ENST00000621783 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
CPNE3-212ENST00000621783 SMCO3A2RU48 225 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 DNAJC9-AS1A6NH13 148 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 LINC01548A6NM66 108 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 CYSRT1A8MQ03 144 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 RGS13O14921 159 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 FBXO24O75426 580 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 IFNA5P01569 189 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 IGHG2P01859 326 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 CRYGCP07315 174 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 SRD5A1P18405 259 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 OPRK1P41145 380 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 CRIP2P52943 208 aaPredicted RBP8.39□□□□□ -1.07
CPNE3-212ENST00000621783 BLCAPP62952 87 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 EXOSC2Q13868 293 aaKnown RBP8.39□□□□□ -1.07
CPNE3-212ENST00000621783 ARSJQ5FYB0 599 aaPredicted RBP8.39□□□□□ -1.07
CPNE3-212ENST00000621783 SLC25A24Q6NUK1 477 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 RBMS3Q6XE24 437 aaKnown RBP8.39□□□□□ -1.07
CPNE3-212ENST00000621783 Q6ZS46 218 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 SLC16A13Q7RTY0 426 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 SLC35E3Q7Z769 313 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 BAP18Q8IXM2 172 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 TTC9CQ8N5M4 171 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 TMEM86BQ8N661 226 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 HSD17B11Q8NBQ5 300 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 LFNGQ8NES3 379 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 FAM110DQ8TAY7 271 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms