RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 MARCH11A6NNE9 402 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 PRAF2O60831 178 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 OR2J3O76001 311 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 IGLV1-51P01701 117 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 NHLRC4P0CG21 123 aaPredicted RBP13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 G6PCP35575 357 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 RPL8P62917 257 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 ATP5G2Q06055 141 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 LYG2Q86SG7 212 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 OR4A16Q8NH70 328 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 RBPMSQ93062 196 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 TMEM230Q96A57 120 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 BET1LQ9NYM9 111 aa13.71□□□□□ -0.21
SCAMP4-213ENST00000621748 TRAV3A0A0B4J244 114 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 C9orf170A2RU37 121 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 CGB1A6NKQ9 187 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 CDS2O95674 445 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 IFNA21P01568 189 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 AREGP15514 252 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 EXOSC2Q13868 293 aaKnown RBP13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 ZNF585BQ52M93 769 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 UXS1Q8NBZ7 420 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 PDCD10Q9BUL8 212 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 FKBP11Q9NYL4 201 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
SCAMP4-213ENST00000621748 DUXBA0A1W2PPF3 345 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 BMPR1BO00238 502 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 HLA-GP17693 338 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 DHRS2Q13268 280 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 TMEM187Q14656 261 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 POU2AF1Q16633 256 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 C15orf32Q32M92 178 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 FAM219AQ8IW50 185 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 GLYATL2Q8WU03 294 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
SCAMP4-213ENST00000621748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 UPK2O00526 184 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 IL5P05113 134 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 CRYGCP07315 174 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 CSN3P07498 182 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 PSMB6P28072 239 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 TATDN3Q17R31 274 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 SELENOHQ8IZQ5 122 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 ZNF431Q8TF32 576 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 TMEM56Q96MV1 263 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 MARVELD1Q9BSK0 173 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 PRNDQ9UKY0 176 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 DMRT1Q9Y5R6 373 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 TMEM56-RWDD3S4R434 201 aa13.68□□□□□ -0.22
SCAMP4-213ENST00000621748 TENM3Q9P273 2699 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 A0A0B4J2A0 478 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 NDUFB8O95169 186 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 REG1AP05451 166 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 CTRB1P17538 263 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 OR2B8PP59922 312 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 CTRB2Q6GPI1 263 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 SBSPONQ8IVN8 264 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 SHPKQ9UHJ6 478 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 TMED3Q9Y3Q3 217 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 U3KQK5 164 aa13.67□□□□□ -0.22
SCAMP4-213ENST00000621748 MECP2P51608 486 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 KLK9Q2XQG4 91 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 CADM3Q8N126 398 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 Q8N1Y9 231 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 SLC35G3Q8N808 338 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 LSM10Q969L4 123 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 SEC22AQ96IW7 307 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 WWC2-AS2Q96NR7 200 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 SIGLEC8Q9NYZ4 499 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 KLK9Q9UKQ9 250 aa13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 KMT2CQ8NEZ4 4911 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-213ENST00000621748 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 PPP5D1E7EU14 171 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 SSNA1O43805 119 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 IGHV3-23P01764 117 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 HOXB5P09067 269 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 LRTM2Q8N967 370 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 MITD1Q8WV92 249 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 SEC22CQ9BRL7 303 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 HINT2Q9BX68 163 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 OR51B2Q9Y5P1 312 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 S4R3C0 116 aa13.65□□□□□ -0.22
SCAMP4-213ENST00000621748 IGLC7A0M8Q6 106 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 SNRPGP15A8MWD9 76 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms